Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHF1O43189 AC242852.2-201ENST00000615738 1807 ntBASIC18.57■□□□□ 0.56
PHF1O43189 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHF1O43189 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
PHF1O43189 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PHF1O43189 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.57■□□□□ 0.56
PHF1O43189 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHF1O43189 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PHF1O43189 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHF1O43189 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHF1O43189 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHF1O43189 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHF1O43189 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHF1O43189 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHF1O43189 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHF1O43189 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PHF1O43189 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.56■□□□□ 0.56
PHF1O43189 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
PHF1O43189 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHF1O43189 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHF1O43189 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHF1O43189 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.55■□□□□ 0.56
PHF1O43189 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.55■□□□□ 0.56
PHF1O43189 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.55■□□□□ 0.56
PHF1O43189 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHF1O43189 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PHF1O43189 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.55■□□□□ 0.56
PHF1O43189 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.55■□□□□ 0.56
PHF1O43189 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.55■□□□□ 0.56
PHF1O43189 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PHF1O43189 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.55■□□□□ 0.56
PHF1O43189 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.55■□□□□ 0.56
PHF1O43189 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
PHF1O43189 AC136469.2-201ENST00000623944 1028 ntBASIC18.55■□□□□ 0.56
PHF1O43189 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHF1O43189 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PHF1O43189 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PHF1O43189 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PHF1O43189 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.54■□□□□ 0.56
PHF1O43189 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PHF1O43189 ESRRAP2-201ENST00000418437 1549 ntBASIC18.54■□□□□ 0.56
PHF1O43189 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PHF1O43189 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PHF1O43189 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
PHF1O43189 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.54■□□□□ 0.56
PHF1O43189 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PHF1O43189 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PHF1O43189 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PHF1O43189 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PHF1O43189 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.54■□□□□ 0.56
PHF1O43189 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.54■□□□□ 0.56
PHF1O43189 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.54■□□□□ 0.56
PHF1O43189 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PHF1O43189 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PHF1O43189 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PHF1O43189 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PHF1O43189 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.53■□□□□ 0.56
PHF1O43189 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
PHF1O43189 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.53■□□□□ 0.56
PHF1O43189 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PHF1O43189 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PHF1O43189 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.53■□□□□ 0.56
PHF1O43189 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.53■□□□□ 0.56
PHF1O43189 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.53■□□□□ 0.56
PHF1O43189 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.53■□□□□ 0.56
PHF1O43189 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.53■□□□□ 0.56
PHF1O43189 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PHF1O43189 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PHF1O43189 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PHF1O43189 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.53■□□□□ 0.56
PHF1O43189 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
PHF1O43189 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PHF1O43189 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PHF1O43189 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PHF1O43189 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.53■□□□□ 0.56
PHF1O43189 AC144652.1-201ENST00000609974 1624 ntBASIC18.52■□□□□ 0.56
PHF1O43189 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.52■□□□□ 0.56
PHF1O43189 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PHF1O43189 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PHF1O43189 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.52■□□□□ 0.56
PHF1O43189 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PHF1O43189 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PHF1O43189 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
PHF1O43189 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.52■□□□□ 0.56
PHF1O43189 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PHF1O43189 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PHF1O43189 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.52■□□□□ 0.56
PHF1O43189 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.52■□□□□ 0.56
PHF1O43189 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.52■□□□□ 0.56
PHF1O43189 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.52■□□□□ 0.56
PHF1O43189 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.52■□□□□ 0.56
PHF1O43189 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PHF1O43189 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PHF1O43189 AC007375.3-201ENST00000600936 2314 ntBASIC18.52■□□□□ 0.56
PHF1O43189 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PHF1O43189 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PHF1O43189 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHF1O43189 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.51■□□□□ 0.55
PHF1O43189 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHF1O43189 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms