Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.18■■□□□ 1.3
SPTLC1O15269 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SPTLC1O15269 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.18■■□□□ 1.3
SPTLC1O15269 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.18■■□□□ 1.3
SPTLC1O15269 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SPTLC1O15269 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPTLC1O15269 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SPTLC1O15269 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.17■■□□□ 1.3
SPTLC1O15269 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPTLC1O15269 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SPTLC1O15269 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SPTLC1O15269 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.17■■□□□ 1.3
SPTLC1O15269 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SPTLC1O15269 NTF6G-201ENST00000591094 616 ntBASIC23.17■■□□□ 1.3
SPTLC1O15269 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SPTLC1O15269 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SPTLC1O15269 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SPTLC1O15269 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPTLC1O15269 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPTLC1O15269 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPTLC1O15269 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPTLC1O15269 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPTLC1O15269 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.17■■□□□ 1.3
SPTLC1O15269 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPTLC1O15269 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPTLC1O15269 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPTLC1O15269 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPTLC1O15269 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPTLC1O15269 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPTLC1O15269 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
SPTLC1O15269 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.16■■□□□ 1.3
SPTLC1O15269 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPTLC1O15269 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.16■■□□□ 1.3
SPTLC1O15269 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.16■■□□□ 1.3
SPTLC1O15269 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPTLC1O15269 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.16■■□□□ 1.3
SPTLC1O15269 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPTLC1O15269 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPTLC1O15269 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPTLC1O15269 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SPTLC1O15269 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.15■■□□□ 1.3
SPTLC1O15269 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPTLC1O15269 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPTLC1O15269 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.15■■□□□ 1.3
SPTLC1O15269 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.15■■□□□ 1.3
SPTLC1O15269 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SPTLC1O15269 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SPTLC1O15269 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SPTLC1O15269 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SPTLC1O15269 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.14■■□□□ 1.3
SPTLC1O15269 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SPTLC1O15269 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
SPTLC1O15269 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
SPTLC1O15269 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
SPTLC1O15269 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.14■■□□□ 1.29
SPTLC1O15269 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.14■■□□□ 1.29
SPTLC1O15269 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPTLC1O15269 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPTLC1O15269 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPTLC1O15269 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPTLC1O15269 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.13■■□□□ 1.29
SPTLC1O15269 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SPTLC1O15269 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SPTLC1O15269 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.13■■□□□ 1.29
SPTLC1O15269 AC092437.1-201ENST00000624794 1048 ntBASIC23.13■■□□□ 1.29
SPTLC1O15269 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPTLC1O15269 OR7E47P-201ENST00000546390 1422 ntBASIC23.13■■□□□ 1.29
SPTLC1O15269 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPTLC1O15269 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SPTLC1O15269 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.13■■□□□ 1.29
SPTLC1O15269 AC005224.4-201ENST00000583262 1652 ntBASIC23.13■■□□□ 1.29
SPTLC1O15269 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.12■■□□□ 1.29
SPTLC1O15269 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SPTLC1O15269 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.12■■□□□ 1.29
SPTLC1O15269 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPTLC1O15269 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.12■■□□□ 1.29
SPTLC1O15269 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SPTLC1O15269 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SPTLC1O15269 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.12■■□□□ 1.29
SPTLC1O15269 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.12■■□□□ 1.29
SPTLC1O15269 AC139530.1-201ENST00000575312 1977 ntBASIC23.12■■□□□ 1.29
SPTLC1O15269 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.12■■□□□ 1.29
SPTLC1O15269 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPTLC1O15269 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPTLC1O15269 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPTLC1O15269 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.11■■□□□ 1.29
SPTLC1O15269 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SPTLC1O15269 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SPTLC1O15269 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SPTLC1O15269 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SPTLC1O15269 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SPTLC1O15269 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.11■■□□□ 1.29
SPTLC1O15269 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.11■■□□□ 1.29
SPTLC1O15269 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.11■■□□□ 1.29
SPTLC1O15269 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.11■■□□□ 1.29
SPTLC1O15269 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SPTLC1O15269 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SPTLC1O15269 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SPTLC1O15269 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SPTLC1O15269 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms