Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPK1AO00322 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
UPK1AO00322 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
UPK1AO00322 SYT6-210ENST00000641643 1587 ntBASIC20.51■□□□□ 0.87
UPK1AO00322 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPK1AO00322 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.5■□□□□ 0.87
UPK1AO00322 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPK1AO00322 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPK1AO00322 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
UPK1AO00322 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.5■□□□□ 0.87
UPK1AO00322 SERBP1P1-201ENST00000396021 1160 ntBASIC20.5■□□□□ 0.87
UPK1AO00322 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.5■□□□□ 0.87
UPK1AO00322 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.5■□□□□ 0.87
UPK1AO00322 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.5■□□□□ 0.87
UPK1AO00322 AC005229.4-201ENST00000610085 2198 ntBASIC20.5■□□□□ 0.87
UPK1AO00322 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.5■□□□□ 0.87
UPK1AO00322 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
UPK1AO00322 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
UPK1AO00322 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPK1AO00322 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.49■□□□□ 0.87
UPK1AO00322 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPK1AO00322 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPK1AO00322 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.49■□□□□ 0.87
UPK1AO00322 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPK1AO00322 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UPK1AO00322 DUX4L19-201ENST00000557448 1267 ntBASIC20.49■□□□□ 0.87
UPK1AO00322 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.49■□□□□ 0.87
UPK1AO00322 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
UPK1AO00322 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
UPK1AO00322 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
UPK1AO00322 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UPK1AO00322 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UPK1AO00322 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
UPK1AO00322 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPK1AO00322 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
UPK1AO00322 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.48■□□□□ 0.87
UPK1AO00322 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.48■□□□□ 0.87
UPK1AO00322 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.48■□□□□ 0.87
UPK1AO00322 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UPK1AO00322 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.48■□□□□ 0.87
UPK1AO00322 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UPK1AO00322 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
UPK1AO00322 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPK1AO00322 AC073130.3-201ENST00000624389 2278 ntBASIC20.47■□□□□ 0.87
UPK1AO00322 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPK1AO00322 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPK1AO00322 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPK1AO00322 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.47■□□□□ 0.87
UPK1AO00322 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPK1AO00322 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.47■□□□□ 0.87
UPK1AO00322 AL138724.1-201ENST00000606771 1088 ntBASIC20.47■□□□□ 0.87
UPK1AO00322 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPK1AO00322 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UPK1AO00322 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
UPK1AO00322 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.47■□□□□ 0.87
UPK1AO00322 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPK1AO00322 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UPK1AO00322 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.46■□□□□ 0.87
UPK1AO00322 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
UPK1AO00322 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPK1AO00322 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
UPK1AO00322 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.46■□□□□ 0.87
UPK1AO00322 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPK1AO00322 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
UPK1AO00322 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.46■□□□□ 0.87
UPK1AO00322 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPK1AO00322 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
UPK1AO00322 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UPK1AO00322 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.46■□□□□ 0.87
UPK1AO00322 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
UPK1AO00322 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPK1AO00322 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.46■□□□□ 0.87
UPK1AO00322 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.46■□□□□ 0.87
UPK1AO00322 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.46■□□□□ 0.87
UPK1AO00322 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UPK1AO00322 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPK1AO00322 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
UPK1AO00322 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
UPK1AO00322 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UPK1AO00322 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPK1AO00322 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPK1AO00322 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.45■□□□□ 0.86
UPK1AO00322 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPK1AO00322 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UPK1AO00322 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
UPK1AO00322 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UPK1AO00322 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
UPK1AO00322 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPK1AO00322 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.45■□□□□ 0.86
UPK1AO00322 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UPK1AO00322 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPK1AO00322 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.44■□□□□ 0.86
UPK1AO00322 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPK1AO00322 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.44■□□□□ 0.86
UPK1AO00322 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPK1AO00322 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
UPK1AO00322 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.44■□□□□ 0.86
UPK1AO00322 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
UPK1AO00322 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.44■□□□□ 0.86
UPK1AO00322 CA15P2-201ENST00000611168 834 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms