Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.58■□□□□ 0.72
CENPBD1B2RD01 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CENPBD1B2RD01 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CENPBD1B2RD01 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CENPBD1B2RD01 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.58■□□□□ 0.72
CENPBD1B2RD01 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CENPBD1B2RD01 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.58■□□□□ 0.72
CENPBD1B2RD01 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.58■□□□□ 0.72
CENPBD1B2RD01 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CENPBD1B2RD01 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CENPBD1B2RD01 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CENPBD1B2RD01 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CENPBD1B2RD01 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.57■□□□□ 0.72
CENPBD1B2RD01 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPBD1B2RD01 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CENPBD1B2RD01 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 DUX4L19-201ENST00000557448 1267 ntBASIC19.55■□□□□ 0.72
CENPBD1B2RD01 AC099791.2-201ENST00000605725 427 ntBASIC19.55■□□□□ 0.72
CENPBD1B2RD01 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPBD1B2RD01 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 AC092053.2-201ENST00000640557 1818 ntBASIC19.54■□□□□ 0.72
CENPBD1B2RD01 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 AL138724.1-201ENST00000606771 1088 ntBASIC19.54■□□□□ 0.72
CENPBD1B2RD01 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.54■□□□□ 0.72
CENPBD1B2RD01 AC087742.1-201ENST00000575880 1738 ntBASIC19.54■□□□□ 0.72
CENPBD1B2RD01 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPBD1B2RD01 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CENPBD1B2RD01 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPBD1B2RD01 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.53■□□□□ 0.72
CENPBD1B2RD01 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CENPBD1B2RD01 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CENPBD1B2RD01 AC004687.1-201ENST00000579003 1625 ntBASIC19.53■□□□□ 0.72
CENPBD1B2RD01 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.53■□□□□ 0.72
CENPBD1B2RD01 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CENPBD1B2RD01 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CENPBD1B2RD01 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CENPBD1B2RD01 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms