Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.41■□□□□ 0.38
SRRM4A7MD48 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.41■□□□□ 0.38
SRRM4A7MD48 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRRM4A7MD48 AL138724.1-201ENST00000606771 1088 ntBASIC17.41■□□□□ 0.38
SRRM4A7MD48 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.41■□□□□ 0.38
SRRM4A7MD48 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SRRM4A7MD48 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRRM4A7MD48 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRRM4A7MD48 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRRM4A7MD48 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SRRM4A7MD48 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.4■□□□□ 0.38
SRRM4A7MD48 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.4■□□□□ 0.38
SRRM4A7MD48 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRRM4A7MD48 DUX4L19-201ENST00000557448 1267 ntBASIC17.4■□□□□ 0.38
SRRM4A7MD48 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRRM4A7MD48 AC068587.7-201ENST00000641602 218 ntBASIC17.4■□□□□ 0.38
SRRM4A7MD48 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRRM4A7MD48 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRRM4A7MD48 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRRM4A7MD48 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SRRM4A7MD48 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.4■□□□□ 0.38
SRRM4A7MD48 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SRRM4A7MD48 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.4■□□□□ 0.38
SRRM4A7MD48 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.39■□□□□ 0.38
SRRM4A7MD48 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.39■□□□□ 0.38
SRRM4A7MD48 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRRM4A7MD48 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
SRRM4A7MD48 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SRRM4A7MD48 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SRRM4A7MD48 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRRM4A7MD48 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRRM4A7MD48 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.39■□□□□ 0.37
SRRM4A7MD48 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.39■□□□□ 0.37
SRRM4A7MD48 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.39■□□□□ 0.37
SRRM4A7MD48 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRRM4A7MD48 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SRRM4A7MD48 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.39■□□□□ 0.37
SRRM4A7MD48 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.39■□□□□ 0.37
SRRM4A7MD48 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRRM4A7MD48 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRRM4A7MD48 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRRM4A7MD48 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRRM4A7MD48 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRRM4A7MD48 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SRRM4A7MD48 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRRM4A7MD48 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRRM4A7MD48 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRRM4A7MD48 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SRRM4A7MD48 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.38■□□□□ 0.37
SRRM4A7MD48 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SRRM4A7MD48 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRRM4A7MD48 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.38■□□□□ 0.37
SRRM4A7MD48 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
SRRM4A7MD48 AC136469.2-201ENST00000623944 1028 ntBASIC17.38■□□□□ 0.37
SRRM4A7MD48 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.38■□□□□ 0.37
SRRM4A7MD48 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRRM4A7MD48 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.38■□□□□ 0.37
SRRM4A7MD48 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.38■□□□□ 0.37
SRRM4A7MD48 AL137060.1-201ENST00000618151 2648 ntBASIC17.38■□□□□ 0.37
SRRM4A7MD48 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRRM4A7MD48 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRRM4A7MD48 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRRM4A7MD48 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
SRRM4A7MD48 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRRM4A7MD48 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRRM4A7MD48 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRRM4A7MD48 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRRM4A7MD48 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.37■□□□□ 0.37
SRRM4A7MD48 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.37■□□□□ 0.37
SRRM4A7MD48 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SRRM4A7MD48 AL136116.3-201ENST00000402907 1138 ntBASIC17.37■□□□□ 0.37
SRRM4A7MD48 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.37■□□□□ 0.37
SRRM4A7MD48 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.37■□□□□ 0.37
SRRM4A7MD48 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.37■□□□□ 0.37
SRRM4A7MD48 AC011298.3-201ENST00000615796 283 ntBASIC17.37■□□□□ 0.37
SRRM4A7MD48 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.37■□□□□ 0.37
SRRM4A7MD48 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRRM4A7MD48 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SRRM4A7MD48 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRRM4A7MD48 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRRM4A7MD48 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SRRM4A7MD48 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.37■□□□□ 0.37
SRRM4A7MD48 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SRRM4A7MD48 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRRM4A7MD48 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SRRM4A7MD48 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRRM4A7MD48 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SRRM4A7MD48 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRRM4A7MD48 AC010141.3-201ENST00000456659 717 ntBASIC17.36■□□□□ 0.37
SRRM4A7MD48 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRRM4A7MD48 OR7E47P-201ENST00000546390 1422 ntBASIC17.36■□□□□ 0.37
SRRM4A7MD48 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.36■□□□□ 0.37
SRRM4A7MD48 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRRM4A7MD48 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRRM4A7MD48 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRRM4A7MD48 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM4A7MD48 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM4A7MD48 AC026471.6-201ENST00000622954 1905 ntBASIC17.35■□□□□ 0.37
SRRM4A7MD48 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRRM4A7MD48 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms