Protein–RNA interactions for Protein: A6NKX1

FAM223B, Protein FAM223B, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM223BA6NKX1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 AC079834.2-201ENST00000609776 1949 ntBASIC16.82■□□□□ 0.28
FAM223BA6NKX1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM223BA6NKX1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FAM223BA6NKX1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM223BA6NKX1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.79■□□□□ 0.28
FAM223BA6NKX1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM223BA6NKX1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.79■□□□□ 0.28
FAM223BA6NKX1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM223BA6NKX1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM223BA6NKX1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.79■□□□□ 0.28
FAM223BA6NKX1 MIR572-201ENST00000384983 95 ntBASIC16.79■□□□□ 0.28
FAM223BA6NKX1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM223BA6NKX1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM223BA6NKX1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.79■□□□□ 0.28
FAM223BA6NKX1 PKD1P6-201ENST00000343738 4769 ntBASIC16.79■□□□□ 0.28
FAM223BA6NKX1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM223BA6NKX1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM223BA6NKX1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM223BA6NKX1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.79■□□□□ 0.28
FAM223BA6NKX1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.79■□□□□ 0.28
FAM223BA6NKX1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.79■□□□□ 0.28
FAM223BA6NKX1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 AC105233.4-201ENST00000642045 216 ntBASIC16.78■□□□□ 0.28
FAM223BA6NKX1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM223BA6NKX1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FAM223BA6NKX1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.77■□□□□ 0.28
FAM223BA6NKX1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.77■□□□□ 0.28
FAM223BA6NKX1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FAM223BA6NKX1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms