Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 AP003097.1-201ENST00000530657 1135 ntBASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC25.58■■□□□ 1.69
TMEM88BA6NKF7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TMEM88BA6NKF7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TMEM88BA6NKF7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC25.57■■□□□ 1.68
TMEM88BA6NKF7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25.57■■□□□ 1.68
TMEM88BA6NKF7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
TMEM88BA6NKF7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
TMEM88BA6NKF7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
TMEM88BA6NKF7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.56■■□□□ 1.68
TMEM88BA6NKF7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
TMEM88BA6NKF7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TMEM88BA6NKF7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TMEM88BA6NKF7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
TMEM88BA6NKF7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC25.56■■□□□ 1.68
TMEM88BA6NKF7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC25.56■■□□□ 1.68
TMEM88BA6NKF7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25.56■■□□□ 1.68
TMEM88BA6NKF7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC25.56■■□□□ 1.68
TMEM88BA6NKF7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC25.56■■□□□ 1.68
TMEM88BA6NKF7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC25.56■■□□□ 1.68
TMEM88BA6NKF7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC25.56■■□□□ 1.68
TMEM88BA6NKF7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
TMEM88BA6NKF7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TMEM88BA6NKF7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TMEM88BA6NKF7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TMEM88BA6NKF7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TMEM88BA6NKF7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TMEM88BA6NKF7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
TMEM88BA6NKF7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC25.55■■□□□ 1.68
TMEM88BA6NKF7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
TMEM88BA6NKF7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC25.55■■□□□ 1.68
TMEM88BA6NKF7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.55■■□□□ 1.68
TMEM88BA6NKF7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC25.55■■□□□ 1.68
TMEM88BA6NKF7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TMEM88BA6NKF7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TMEM88BA6NKF7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TMEM88BA6NKF7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.54■■□□□ 1.68
TMEM88BA6NKF7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TMEM88BA6NKF7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.54■■□□□ 1.68
TMEM88BA6NKF7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.54■■□□□ 1.68
TMEM88BA6NKF7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.54■■□□□ 1.68
TMEM88BA6NKF7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC25.54■■□□□ 1.68
TMEM88BA6NKF7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TMEM88BA6NKF7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TMEM88BA6NKF7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
TMEM88BA6NKF7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
TMEM88BA6NKF7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC25.53■■□□□ 1.68
TMEM88BA6NKF7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC25.53■■□□□ 1.68
TMEM88BA6NKF7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
TMEM88BA6NKF7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC25.53■■□□□ 1.68
TMEM88BA6NKF7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM88BA6NKF7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM88BA6NKF7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM88BA6NKF7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.52■■□□□ 1.68
TMEM88BA6NKF7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM88BA6NKF7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM88BA6NKF7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEM88BA6NKF7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC25.52■■□□□ 1.68
TMEM88BA6NKF7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC25.51■■□□□ 1.67
TMEM88BA6NKF7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.51■■□□□ 1.67
TMEM88BA6NKF7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC25.51■■□□□ 1.67
TMEM88BA6NKF7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.51■■□□□ 1.67
TMEM88BA6NKF7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TMEM88BA6NKF7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
TMEM88BA6NKF7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
TMEM88BA6NKF7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMEM88BA6NKF7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
TMEM88BA6NKF7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMEM88BA6NKF7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMEM88BA6NKF7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMEM88BA6NKF7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMEM88BA6NKF7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMEM88BA6NKF7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TMEM88BA6NKF7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TMEM88BA6NKF7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
TMEM88BA6NKF7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
TMEM88BA6NKF7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.5■■□□□ 1.67
TMEM88BA6NKF7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.49■■□□□ 1.67
TMEM88BA6NKF7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.49■■□□□ 1.67
TMEM88BA6NKF7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms