Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
TRBV6-4A0A1B0GX49 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 AL136116.3-201ENST00000402907 1138 ntBASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 AP005435.1-201ENST00000529293 1178 ntBASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 OXCT2P1-201ENST00000447263 1535 ntBASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRBV6-4A0A1B0GX49 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV6-4A0A1B0GX49 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-4A0A1B0GX49 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-4A0A1B0GX49 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV6-4A0A1B0GX49 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV6-4A0A1B0GX49 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRBV6-4A0A1B0GX49 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-4A0A1B0GX49 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV6-4A0A1B0GX49 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-4A0A1B0GX49 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-4A0A1B0GX49 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-4A0A1B0GX49 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-4A0A1B0GX49 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV6-4A0A1B0GX49 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.24■□□□□ 0.03
TRBV6-4A0A1B0GX49 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 FBXW4P1-201ENST00000426721 2239 ntBASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV6-4A0A1B0GX49 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 FAM99A-202ENST00000538190 1989 ntBASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 AC010525.1-201ENST00000585559 441 ntBASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 AC131212.1-201ENST00000613771 668 ntBASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-4A0A1B0GX49 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV6-4A0A1B0GX49 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRBV6-4A0A1B0GX49 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRBV6-4A0A1B0GX49 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-4A0A1B0GX49 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-4A0A1B0GX49 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-4A0A1B0GX49 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRBV6-4A0A1B0GX49 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms