Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 Z98882.1-201ENST00000622160 2253 ntBASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 RNF166-209ENST00000567844 633 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV13-2A0A0B4J235 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 RNF165-205ENST00000588679 2904 ntBASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 GFER-205ENST00000569451 517 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 AC092296.2-201ENST00000589470 999 ntBASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV13-2A0A0B4J235 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 AC144652.1-201ENST00000609974 1624 ntBASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV13-2A0A0B4J235 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 AC090340.1-201ENST00000620778 4980 ntBASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 FEM1AP4-201ENST00000443167 1987 ntBASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 AC026202.3-201ENST00000600805 1127 ntBASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV13-2A0A0B4J235 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV13-2A0A0B4J235 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV13-2A0A0B4J235 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.21□□□□□ -0.13
TRAV13-2A0A0B4J235 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms