Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-1A0A075B6T8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 LINC01960-201ENST00000563759 1884 ntBASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-1A0A075B6T8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 AL020996.1-203ENST00000536896 2307 ntBASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 BX323043.1-201ENST00000641006 1765 ntBASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-1A0A075B6T8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV9-1A0A075B6T8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
TRAV9-1A0A075B6T8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 AL592295.1-201ENST00000400984 884 ntBASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV9-1A0A075B6T8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV9-1A0A075B6T8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms