Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.94■□□□□ 0.94
RPH3ALQ9UNE2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPH3ALQ9UNE2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RPH3ALQ9UNE2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.92■□□□□ 0.94
RPH3ALQ9UNE2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPH3ALQ9UNE2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPH3ALQ9UNE2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPH3ALQ9UNE2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.92■□□□□ 0.94
RPH3ALQ9UNE2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.91■□□□□ 0.94
RPH3ALQ9UNE2 ABCB10P3-201ENST00000561950 2166 ntBASIC20.91■□□□□ 0.94
RPH3ALQ9UNE2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPH3ALQ9UNE2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPH3ALQ9UNE2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
RPH3ALQ9UNE2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPH3ALQ9UNE2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPH3ALQ9UNE2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPH3ALQ9UNE2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.87■□□□□ 0.93
RPH3ALQ9UNE2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPH3ALQ9UNE2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPH3ALQ9UNE2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPH3ALQ9UNE2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.87■□□□□ 0.93
RPH3ALQ9UNE2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPH3ALQ9UNE2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.85■□□□□ 0.93
RPH3ALQ9UNE2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPH3ALQ9UNE2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RPH3ALQ9UNE2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPH3ALQ9UNE2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPH3ALQ9UNE2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPH3ALQ9UNE2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPH3ALQ9UNE2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPH3ALQ9UNE2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPH3ALQ9UNE2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPH3ALQ9UNE2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPH3ALQ9UNE2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPH3ALQ9UNE2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
RPH3ALQ9UNE2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RPH3ALQ9UNE2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.8■□□□□ 0.92
RPH3ALQ9UNE2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPH3ALQ9UNE2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPH3ALQ9UNE2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.8■□□□□ 0.92
RPH3ALQ9UNE2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.79■□□□□ 0.92
RPH3ALQ9UNE2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPH3ALQ9UNE2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPH3ALQ9UNE2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPH3ALQ9UNE2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPH3ALQ9UNE2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RPH3ALQ9UNE2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPH3ALQ9UNE2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
RPH3ALQ9UNE2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RPH3ALQ9UNE2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPH3ALQ9UNE2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPH3ALQ9UNE2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RPH3ALQ9UNE2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RPH3ALQ9UNE2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
RPH3ALQ9UNE2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPH3ALQ9UNE2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.72■□□□□ 0.91
RPH3ALQ9UNE2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPH3ALQ9UNE2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.72■□□□□ 0.91
RPH3ALQ9UNE2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPH3ALQ9UNE2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.7■□□□□ 0.91
RPH3ALQ9UNE2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPH3ALQ9UNE2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RPH3ALQ9UNE2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RPH3ALQ9UNE2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPH3ALQ9UNE2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPH3ALQ9UNE2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPH3ALQ9UNE2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPH3ALQ9UNE2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPH3ALQ9UNE2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPH3ALQ9UNE2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPH3ALQ9UNE2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RPH3ALQ9UNE2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPH3ALQ9UNE2 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.65■□□□□ 0.9
RPH3ALQ9UNE2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPH3ALQ9UNE2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.64■□□□□ 0.9
RPH3ALQ9UNE2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
RPH3ALQ9UNE2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3ALQ9UNE2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3ALQ9UNE2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3ALQ9UNE2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3ALQ9UNE2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3ALQ9UNE2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3ALQ9UNE2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPH3ALQ9UNE2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPH3ALQ9UNE2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPH3ALQ9UNE2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.6■□□□□ 0.89
RPH3ALQ9UNE2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RPH3ALQ9UNE2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.6■□□□□ 0.89
RPH3ALQ9UNE2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPH3ALQ9UNE2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPH3ALQ9UNE2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPH3ALQ9UNE2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RPH3ALQ9UNE2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPH3ALQ9UNE2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPH3ALQ9UNE2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPH3ALQ9UNE2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPH3ALQ9UNE2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.57■□□□□ 0.88
RPH3ALQ9UNE2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPH3ALQ9UNE2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPH3ALQ9UNE2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms