Protein–RNA interactions for Protein: Q9H4I9

SMDT1, Essential MCU regulator, mitochondrial, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1Q9H4I9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMDT1Q9H4I9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMDT1Q9H4I9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMDT1Q9H4I9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SMDT1Q9H4I9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.55■■□□□ 1.04
SMDT1Q9H4I9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMDT1Q9H4I9 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMDT1Q9H4I9 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMDT1Q9H4I9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMDT1Q9H4I9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMDT1Q9H4I9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMDT1Q9H4I9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMDT1Q9H4I9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SMDT1Q9H4I9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMDT1Q9H4I9 AC120057.4-201ENST00000624722 1615 ntBASIC21.51■■□□□ 1.03
SMDT1Q9H4I9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
SMDT1Q9H4I9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.5■■□□□ 1.03
SMDT1Q9H4I9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMDT1Q9H4I9 AC142086.6-201ENST00000621154 1765 ntBASIC21.49■■□□□ 1.03
SMDT1Q9H4I9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMDT1Q9H4I9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMDT1Q9H4I9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMDT1Q9H4I9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.47■■□□□ 1.03
SMDT1Q9H4I9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SMDT1Q9H4I9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMDT1Q9H4I9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.46■■□□□ 1.03
SMDT1Q9H4I9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SMDT1Q9H4I9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMDT1Q9H4I9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.45■■□□□ 1.02
SMDT1Q9H4I9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMDT1Q9H4I9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.44■■□□□ 1.02
SMDT1Q9H4I9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMDT1Q9H4I9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMDT1Q9H4I9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMDT1Q9H4I9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMDT1Q9H4I9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMDT1Q9H4I9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.4■■□□□ 1.02
SMDT1Q9H4I9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SMDT1Q9H4I9 AC135731.1-201ENST00000569415 2548 ntBASIC21.39■■□□□ 1.02
SMDT1Q9H4I9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SMDT1Q9H4I9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SMDT1Q9H4I9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMDT1Q9H4I9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMDT1Q9H4I9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMDT1Q9H4I9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMDT1Q9H4I9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMDT1Q9H4I9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SMDT1Q9H4I9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMDT1Q9H4I9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SMDT1Q9H4I9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMDT1Q9H4I9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMDT1Q9H4I9 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMDT1Q9H4I9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
SMDT1Q9H4I9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.34■■□□□ 1.01
SMDT1Q9H4I9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.33■■□□□ 1
SMDT1Q9H4I9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMDT1Q9H4I9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMDT1Q9H4I9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SMDT1Q9H4I9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMDT1Q9H4I9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.3■■□□□ 1
SMDT1Q9H4I9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.3■■□□□ 1
SMDT1Q9H4I9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
SMDT1Q9H4I9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMDT1Q9H4I9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.29■■□□□ 1
SMDT1Q9H4I9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SMDT1Q9H4I9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.29■■□□□ 1
SMDT1Q9H4I9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.29■■□□□ 1
SMDT1Q9H4I9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMDT1Q9H4I9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMDT1Q9H4I9 ST7-AS1-201ENST00000456775 1889 ntBASIC21.27■■□□□ 1
SMDT1Q9H4I9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.27■□□□□ 0.99
SMDT1Q9H4I9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SMDT1Q9H4I9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMDT1Q9H4I9 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC21.26■□□□□ 0.99
SMDT1Q9H4I9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.26■□□□□ 0.99
SMDT1Q9H4I9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMDT1Q9H4I9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMDT1Q9H4I9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMDT1Q9H4I9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMDT1Q9H4I9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SMDT1Q9H4I9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMDT1Q9H4I9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMDT1Q9H4I9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMDT1Q9H4I9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SMDT1Q9H4I9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.2■□□□□ 0.98
SMDT1Q9H4I9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMDT1Q9H4I9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.2■□□□□ 0.98
SMDT1Q9H4I9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SMDT1Q9H4I9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMDT1Q9H4I9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.19■□□□□ 0.98
SMDT1Q9H4I9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMDT1Q9H4I9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMDT1Q9H4I9 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SMDT1Q9H4I9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SMDT1Q9H4I9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMDT1Q9H4I9 AL121749.1-202ENST00000609313 2153 ntBASIC21.18■□□□□ 0.98
SMDT1Q9H4I9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMDT1Q9H4I9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SMDT1Q9H4I9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SMDT1Q9H4I9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms