Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26■■□□□ 1.75
CHD6Q8TD26 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.98■■□□□ 1.75
CHD6Q8TD26 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
CHD6Q8TD26 DUX4L29-201ENST00000425409 679 ntBASIC25.97■■□□□ 1.75
CHD6Q8TD26 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.97■■□□□ 1.75
CHD6Q8TD26 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.97■■□□□ 1.75
CHD6Q8TD26 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHD6Q8TD26 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHD6Q8TD26 ABHD17AP5-201ENST00000580133 923 ntBASIC25.95■■□□□ 1.75
CHD6Q8TD26 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.94■■□□□ 1.74
CHD6Q8TD26 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CHD6Q8TD26 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
CHD6Q8TD26 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.93■■□□□ 1.74
CHD6Q8TD26 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.92■■□□□ 1.74
CHD6Q8TD26 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CHD6Q8TD26 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.92■■□□□ 1.74
CHD6Q8TD26 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.92■■□□□ 1.74
CHD6Q8TD26 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
CHD6Q8TD26 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
CHD6Q8TD26 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.9■■□□□ 1.74
CHD6Q8TD26 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CHD6Q8TD26 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CHD6Q8TD26 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CHD6Q8TD26 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.87■■□□□ 1.73
CHD6Q8TD26 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CHD6Q8TD26 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.87■■□□□ 1.73
CHD6Q8TD26 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.87■■□□□ 1.73
CHD6Q8TD26 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
CHD6Q8TD26 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CHD6Q8TD26 AC145285.7-201ENST00000614819 1539 ntBASIC25.85■■□□□ 1.73
CHD6Q8TD26 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.85■■□□□ 1.73
CHD6Q8TD26 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CHD6Q8TD26 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CHD6Q8TD26 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHD6Q8TD26 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.82■■□□□ 1.72
CHD6Q8TD26 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
CHD6Q8TD26 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CHD6Q8TD26 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHD6Q8TD26 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.8■■□□□ 1.72
CHD6Q8TD26 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHD6Q8TD26 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.79■■□□□ 1.72
CHD6Q8TD26 AC021231.2-201ENST00000594613 730 ntBASIC25.79■■□□□ 1.72
CHD6Q8TD26 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CHD6Q8TD26 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHD6Q8TD26 AL592295.1-201ENST00000400984 884 ntBASIC25.77■■□□□ 1.72
CHD6Q8TD26 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.77■■□□□ 1.72
CHD6Q8TD26 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHD6Q8TD26 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC25.75■■□□□ 1.71
CHD6Q8TD26 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHD6Q8TD26 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CHD6Q8TD26 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD6Q8TD26 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
CHD6Q8TD26 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CHD6Q8TD26 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CHD6Q8TD26 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHD6Q8TD26 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CHD6Q8TD26 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHD6Q8TD26 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.67■■□□□ 1.7
CHD6Q8TD26 RNF126P1-201ENST00000567452 1320 ntBASIC25.67■■□□□ 1.7
CHD6Q8TD26 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.66■■□□□ 1.7
CHD6Q8TD26 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.65■■□□□ 1.7
CHD6Q8TD26 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHD6Q8TD26 AC018358.1-201ENST00000631079 1402 ntBASIC25.65■■□□□ 1.7
CHD6Q8TD26 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
CHD6Q8TD26 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.62■■□□□ 1.69
CHD6Q8TD26 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CHD6Q8TD26 AC012354.3-201ENST00000623734 483 ntBASIC25.62■■□□□ 1.69
CHD6Q8TD26 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.62■■□□□ 1.69
CHD6Q8TD26 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHD6Q8TD26 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC25.6■■□□□ 1.69
CHD6Q8TD26 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.6■■□□□ 1.69
CHD6Q8TD26 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CHD6Q8TD26 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHD6Q8TD26 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
CHD6Q8TD26 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHD6Q8TD26 MIR935-201ENST00000401179 91 ntBASIC25.58■■□□□ 1.69
CHD6Q8TD26 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.58■■□□□ 1.69
CHD6Q8TD26 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CHD6Q8TD26 DUX4L11-201ENST00000611504 1267 ntBASIC25.57■■□□□ 1.68
CHD6Q8TD26 DUX4L12-201ENST00000614593 1267 ntBASIC25.57■■□□□ 1.68
CHD6Q8TD26 DUX4L14-201ENST00000621227 1267 ntBASIC25.57■■□□□ 1.68
CHD6Q8TD26 NTF6A-201ENST00000591175 560 ntBASIC25.57■■□□□ 1.68
CHD6Q8TD26 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHD6Q8TD26 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.54■■□□□ 1.68
CHD6Q8TD26 LINC01971-201ENST00000617888 1048 ntBASIC25.54■■□□□ 1.68
CHD6Q8TD26 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
CHD6Q8TD26 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHD6Q8TD26 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CHD6Q8TD26 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.51■■□□□ 1.67
CHD6Q8TD26 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
CHD6Q8TD26 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.5■■□□□ 1.67
CHD6Q8TD26 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CHD6Q8TD26 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CHD6Q8TD26 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.47■■□□□ 1.67
CHD6Q8TD26 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.47■■□□□ 1.67
CHD6Q8TD26 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.46■■□□□ 1.67
CHD6Q8TD26 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHD6Q8TD26 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.44■■□□□ 1.66
CHD6Q8TD26 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CHD6Q8TD26 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.43■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms