Protein–RNA interactions for Protein: Q8N5I2

ARRDC1, Arrestin domain-containing protein 1, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1Q8N5I2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
ARRDC1Q8N5I2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC22.8■■□□□ 1.24
ARRDC1Q8N5I2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ARRDC1Q8N5I2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.8■■□□□ 1.24
ARRDC1Q8N5I2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC22.8■■□□□ 1.24
ARRDC1Q8N5I2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
ARRDC1Q8N5I2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ARRDC1Q8N5I2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ARRDC1Q8N5I2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ARRDC1Q8N5I2 AC139426.1-201ENST00000568218 2529 ntBASIC22.78■■□□□ 1.24
ARRDC1Q8N5I2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ARRDC1Q8N5I2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC22.77■■□□□ 1.24
ARRDC1Q8N5I2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
ARRDC1Q8N5I2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ARRDC1Q8N5I2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
ARRDC1Q8N5I2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ARRDC1Q8N5I2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
ARRDC1Q8N5I2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
ARRDC1Q8N5I2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
ARRDC1Q8N5I2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ARRDC1Q8N5I2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ARRDC1Q8N5I2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ARRDC1Q8N5I2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ARRDC1Q8N5I2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ARRDC1Q8N5I2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
ARRDC1Q8N5I2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ARRDC1Q8N5I2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ARRDC1Q8N5I2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
ARRDC1Q8N5I2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
ARRDC1Q8N5I2 MVK-208ENST00000539696 608 ntTSL 5 BASIC22.67■■□□□ 1.22
ARRDC1Q8N5I2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ARRDC1Q8N5I2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ARRDC1Q8N5I2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ARRDC1Q8N5I2 ST7-AS1-201ENST00000456775 1889 ntBASIC22.66■■□□□ 1.22
ARRDC1Q8N5I2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.65■■□□□ 1.22
ARRDC1Q8N5I2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ARRDC1Q8N5I2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ARRDC1Q8N5I2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
ARRDC1Q8N5I2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
ARRDC1Q8N5I2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ARRDC1Q8N5I2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ARRDC1Q8N5I2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
ARRDC1Q8N5I2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ARRDC1Q8N5I2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.63■■□□□ 1.21
ARRDC1Q8N5I2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
ARRDC1Q8N5I2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ARRDC1Q8N5I2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ARRDC1Q8N5I2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
ARRDC1Q8N5I2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ARRDC1Q8N5I2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
ARRDC1Q8N5I2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.57■■□□□ 1.2
ARRDC1Q8N5I2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ARRDC1Q8N5I2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ARRDC1Q8N5I2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.55■■□□□ 1.2
ARRDC1Q8N5I2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC22.55■■□□□ 1.2
ARRDC1Q8N5I2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ARRDC1Q8N5I2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ARRDC1Q8N5I2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ARRDC1Q8N5I2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ARRDC1Q8N5I2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.53■■□□□ 1.2
ARRDC1Q8N5I2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ARRDC1Q8N5I2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
ARRDC1Q8N5I2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
ARRDC1Q8N5I2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ARRDC1Q8N5I2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ARRDC1Q8N5I2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.51■■□□□ 1.19
ARRDC1Q8N5I2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
ARRDC1Q8N5I2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.5■■□□□ 1.19
ARRDC1Q8N5I2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ARRDC1Q8N5I2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.5■■□□□ 1.19
ARRDC1Q8N5I2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
ARRDC1Q8N5I2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC22.49■■□□□ 1.19
ARRDC1Q8N5I2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.49■■□□□ 1.19
ARRDC1Q8N5I2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ARRDC1Q8N5I2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
ARRDC1Q8N5I2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ARRDC1Q8N5I2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.47■■□□□ 1.19
ARRDC1Q8N5I2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ARRDC1Q8N5I2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ARRDC1Q8N5I2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.46■■□□□ 1.19
ARRDC1Q8N5I2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.46■■□□□ 1.19
ARRDC1Q8N5I2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
ARRDC1Q8N5I2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ARRDC1Q8N5I2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ARRDC1Q8N5I2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
ARRDC1Q8N5I2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ARRDC1Q8N5I2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ARRDC1Q8N5I2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ARRDC1Q8N5I2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
ARRDC1Q8N5I2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ARRDC1Q8N5I2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ARRDC1Q8N5I2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ARRDC1Q8N5I2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.41■■□□□ 1.18
ARRDC1Q8N5I2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ARRDC1Q8N5I2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
ARRDC1Q8N5I2 AC142086.6-201ENST00000621154 1765 ntBASIC22.41■■□□□ 1.18
ARRDC1Q8N5I2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ARRDC1Q8N5I2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ARRDC1Q8N5I2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ARRDC1Q8N5I2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms