Protein–RNA interactions for Protein: Q06263

VTA1, Vacuolar protein sorting-associated protein VTA1, yeastyeast

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTA1Q06263 LSC2YGR244C 1284 nt9.92□□□□□ -0.82
VTA1Q06263 YHL019W-AYHL019W-A 594 nt9.91□□□□□ -0.82
VTA1Q06263 COQ2YNR041C 1119 nt9.89□□□□□ -0.83
VTA1Q06263 YML089CYML089C 369 nt9.88□□□□□ -0.83
VTA1Q06263 SNF1YDR477W 1902 nt9.88□□□□□ -0.83
VTA1Q06263 ARP6YLR085C 1317 nt9.87□□□□□ -0.83
VTA1Q06263 IRC24YIR036C 792 nt9.87□□□□□ -0.83
VTA1Q06263 RBG1YAL036C 1110 nt9.87□□□□□ -0.83
VTA1Q06263 NDI1YML120C 1542 nt9.87□□□□□ -0.83
VTA1Q06263 SHH4YLR164W 507 nt9.86□□□□□ -0.83
VTA1Q06263 POM34YLR018C 900 nt9.85□□□□□ -0.83
VTA1Q06263 CLB6YGR109C 1143 nt9.84□□□□□ -0.83
VTA1Q06263 RPL4BYDR012W 1089 nt9.83□□□□□ -0.84
VTA1Q06263 RPL4AYBR031W 1089 nt9.83□□□□□ -0.84
VTA1Q06263 GLR1YPL091W 1452 nt9.82□□□□□ -0.84
VTA1Q06263 BIO5YNR056C 1686 nt9.81□□□□□ -0.84
VTA1Q06263 PRO1YDR300C 1287 nt9.81□□□□□ -0.84
VTA1Q06263 CMP2YML057W 1815 nt9.81□□□□□ -0.84
VTA1Q06263 TOM6YOR045W 186 nt9.8□□□□□ -0.84
VTA1Q06263 UTH1YKR042W 1098 nt9.79□□□□□ -0.84
VTA1Q06263 ATG15YCR068W 1563 nt9.78□□□□□ -0.84
VTA1Q06263 YMR244WYMR244W 1068 nt9.77□□□□□ -0.85
VTA1Q06263 PLB1YMR008C 1995 nt9.77□□□□□ -0.85
VTA1Q06263 HIP1YGR191W 1812 nt9.77□□□□□ -0.85
VTA1Q06263 PBP1YGR178C 2169 nt9.76□□□□□ -0.85
VTA1Q06263 CYT2YKL087C 675 nt9.76□□□□□ -0.85
VTA1Q06263 GAP1YKR039W 1809 nt9.76□□□□□ -0.85
VTA1Q06263 RPS14BYJL191W 417 nt9.74□□□□□ -0.85
VTA1Q06263 PEX2YJL210W 816 nt9.74□□□□□ -0.85
VTA1Q06263 MET28YIR017C 564 nt9.72□□□□□ -0.85
VTA1Q06263 TIF6YPR016C 738 nt9.72□□□□□ -0.85
VTA1Q06263 HSL7YBR133C 2484 nt9.72□□□□□ -0.85
VTA1Q06263 NRT1YOR071C 1797 nt9.71□□□□□ -0.85
VTA1Q06263 YMR226CYMR226C 804 nt9.69□□□□□ -0.86
VTA1Q06263 FIT3YOR383C 615 nt9.66□□□□□ -0.86
VTA1Q06263 TSC10YBR265W 963 nt9.66□□□□□ -0.86
VTA1Q06263 RPM1RPM1 483 nt9.65□□□□□ -0.86
VTA1Q06263 SAM35YHR083W 990 nt9.64□□□□□ -0.87
VTA1Q06263 SDH5YOL071W 489 nt9.64□□□□□ -0.87
VTA1Q06263 YLR111WYLR111W 333 nt9.63□□□□□ -0.87
VTA1Q06263 UTR1YJR049C 1593 nt9.63□□□□□ -0.87
VTA1Q06263 RBG2YGR173W 1107 nt9.62□□□□□ -0.87
VTA1Q06263 RAD23YEL037C 1197 nt9.61□□□□□ -0.87
VTA1Q06263 DIF1YLR437C 402 nt9.61□□□□□ -0.87
VTA1Q06263 YAR028WYAR028W 705 nt9.59□□□□□ -0.87
VTA1Q06263 YGR012WYGR012W 1182 nt9.57□□□□□ -0.88
VTA1Q06263 PRM5YIL117C 957 nt9.55□□□□□ -0.88
VTA1Q06263 ALP1YNL270C 1722 nt9.53□□□□□ -0.88
VTA1Q06263 RDN25-1RDN25-1 3396 nt9.53□□□□□ -0.88
VTA1Q06263 RDN25-2RDN25-2 3396 nt9.53□□□□□ -0.88
VTA1Q06263 YLR279WYLR279W 390 nt9.53□□□□□ -0.88
VTA1Q06263 HEL2YDR266C 1920 nt9.52□□□□□ -0.88
VTA1Q06263 ALD4YOR374W 1560 nt9.5□□□□□ -0.89
VTA1Q06263 MTG2YHR168W 1557 nt9.5□□□□□ -0.89
VTA1Q06263 RIB3YDR487C 627 nt9.49□□□□□ -0.89
VTA1Q06263 HIF1YLL022C 1158 nt9.48□□□□□ -0.89
VTA1Q06263 AKR2YOR034C 2250 nt9.48□□□□□ -0.89
VTA1Q06263 YAT1YAR035W 2064 nt9.46□□□□□ -0.89
VTA1Q06263 SED1YDR077W 1017 nt9.46□□□□□ -0.9
VTA1Q06263 MSB4YOL112W 1479 nt9.46□□□□□ -0.9
VTA1Q06263 YLR437C-AYLR437C-A 228 nt9.44□□□□□ -0.9
VTA1Q06263 YPL222C-AYPL222C-A 246 nt9.44□□□□□ -0.9
VTA1Q06263 ZTA1YBR046C 1005 nt9.43□□□□□ -0.9
VTA1Q06263 LIP1YMR298W 453 nt9.41□□□□□ -0.9
VTA1Q06263 DBP1YPL119C 1854 nt9.4□□□□□ -0.91
VTA1Q06263 HXT1YHR094C 1713 nt9.39□□□□□ -0.91
VTA1Q06263 FRE6YLL051C 2139 nt9.38□□□□□ -0.91
VTA1Q06263 CAB5YDR196C 726 nt9.37□□□□□ -0.91
VTA1Q06263 SAM1YLR180W 1149 nt9.37□□□□□ -0.91
VTA1Q06263 APT2YDR441C 546 nt9.36□□□□□ -0.91
VTA1Q06263 SPT20YOL148C 1815 nt9.35□□□□□ -0.91
VTA1Q06263 YER190C-AYER190C-A 576 nt9.35□□□□□ -0.91
VTA1Q06263 YGR296C-AYGR296C-A 576 nt9.35□□□□□ -0.91
VTA1Q06263 YML133W-AYML133W-A 576 nt9.35□□□□□ -0.91
VTA1Q06263 YNL339W-AYNL339W-A 576 nt9.35□□□□□ -0.91
VTA1Q06263 YPL283W-AYPL283W-A 576 nt9.35□□□□□ -0.91
VTA1Q06263 GND1YHR183W 1470 nt9.34□□□□□ -0.91
VTA1Q06263 FCY21YER060W 1587 nt9.33□□□□□ -0.92
VTA1Q06263 YBL086CYBL086C 1401 nt9.31□□□□□ -0.92
VTA1Q06263 ZRT3YKL175W 1512 nt9.31□□□□□ -0.92
VTA1Q06263 LOT5YKL183W 921 nt9.3□□□□□ -0.92
VTA1Q06263 LEU9YOR108W 1815 nt9.3□□□□□ -0.92
VTA1Q06263 YPI1YFR003C 468 nt9.29□□□□□ -0.92
VTA1Q06263 RIM8YGL045W 1629 nt9.29□□□□□ -0.92
VTA1Q06263 YPL251WYPL251W 303 nt9.28□□□□□ -0.92
VTA1Q06263 BRR1YPR057W 1026 nt9.27□□□□□ -0.93
VTA1Q06263 INA1YLR413W 2028 nt9.26□□□□□ -0.93
VTA1Q06263 TOA2YKL058W 369 nt9.25□□□□□ -0.93
VTA1Q06263 SHY1YGR112W 1170 nt9.24□□□□□ -0.93
VTA1Q06263 SMM1YNR015W 1155 nt9.24□□□□□ -0.93
VTA1Q06263 UGA4YDL210W 1716 nt9.24□□□□□ -0.93
VTA1Q06263 MET2YNL277W 1461 nt9.23□□□□□ -0.93
VTA1Q06263 RPC82YPR190C 1965 nt9.23□□□□□ -0.93
VTA1Q06263 MEP3YPR138C 1470 nt9.22□□□□□ -0.93
VTA1Q06263 YGL114WYGL114W 2178 nt9.22□□□□□ -0.93
VTA1Q06263 PRY1YJL079C 900 nt9.21□□□□□ -0.94
VTA1Q06263 TRT2tT(CGU)K 72 nt9.2□□□□□ -0.94
VTA1Q06263 URA6YKL024C 615 nt9.2□□□□□ -0.94
VTA1Q06263 LSB3YFR024C-A 1380 nt9.2□□□□□ -0.94
VTA1Q06263 YJL067WYJL067W 351 nt9.19□□□□□ -0.94
Retrieved 100 of 7,029 protein–RNA pairs in 6.9 ms