Protein–RNA interactions for Protein: P53867

ATG4, Cysteine protease ATG4, yeastyeast

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG4P53867 CLB6YGR109C 1143 nt8.93□□□□□ -0.98
ATG4P53867 SAM1YLR180W 1149 nt8.92□□□□□ -0.98
ATG4P53867 SDH5YOL071W 489 nt8.92□□□□□ -0.98
ATG4P53867 TOM6YOR045W 186 nt8.91□□□□□ -0.98
ATG4P53867 STR3YGL184C 1398 nt8.89□□□□□ -0.99
ATG4P53867 UTH1YKR042W 1098 nt8.89□□□□□ -0.99
ATG4P53867 AQY2YLL052C 450 nt8.89□□□□□ -0.99
ATG4P53867 PEX2YJL210W 816 nt8.88□□□□□ -0.99
ATG4P53867 POM34YLR018C 900 nt8.88□□□□□ -0.99
ATG4P53867 HIP1YGR191W 1812 nt8.88□□□□□ -0.99
ATG4P53867 RDN18-1RDN18-1 1800 nt8.88□□□□□ -0.99
ATG4P53867 RDN18-2RDN18-2 1800 nt8.88□□□□□ -0.99
ATG4P53867 RAD23YEL037C 1197 nt8.86□□□□□ -0.99
ATG4P53867 YCL074WYCL074W 927 nt8.85□□□□□ -0.99
ATG4P53867 YML089CYML089C 369 nt8.85□□□□□ -0.99
ATG4P53867 HSP60YLR259C 1719 nt8.85□□□□□ -0.99
ATG4P53867 PRO1YDR300C 1287 nt8.84□□□□□ -0.99
ATG4P53867 LSC2YGR244C 1284 nt8.84□□□□□ -0.99
ATG4P53867 TSC10YBR265W 963 nt8.83□□□□□ -1
ATG4P53867 NRT1YOR071C 1797 nt8.83□□□□□ -1
ATG4P53867 YGR012WYGR012W 1182 nt8.82□□□□□ -1
ATG4P53867 FRE6YLL051C 2139 nt8.82□□□□□ -1
ATG4P53867 YLR437C-AYLR437C-A 228 nt8.82□□□□□ -1
ATG4P53867 CAB5YDR196C 726 nt8.81□□□□□ -1
ATG4P53867 TIF6YPR016C 738 nt8.8□□□□□ -1
ATG4P53867 ATG15YCR068W 1563 nt8.8□□□□□ -1
ATG4P53867 SSN3YPL042C 1668 nt8.8□□□□□ -1
ATG4P53867 MET28YIR017C 564 nt8.78□□□□□ -1
ATG4P53867 RIB3YDR487C 627 nt8.76□□□□□ -1.01
ATG4P53867 ARP6YLR085C 1317 nt8.76□□□□□ -1.01
ATG4P53867 YLR279WYLR279W 390 nt8.75□□□□□ -1.01
ATG4P53867 ALG12YNR030W 1656 nt8.73□□□□□ -1.01
ATG4P53867 RAD51YER095W 1203 nt8.73□□□□□ -1.01
ATG4P53867 FUR4YBR021W 1902 nt8.72□□□□□ -1.01
ATG4P53867 GAP1YKR039W 1809 nt8.71□□□□□ -1.01
ATG4P53867 MSB4YOL112W 1479 nt8.7□□□□□ -1.02
ATG4P53867 RTN2YDL204W 1182 nt8.7□□□□□ -1.02
ATG4P53867 FIT3YOR383C 615 nt8.7□□□□□ -1.02
ATG4P53867 PLB1YMR008C 1995 nt8.68□□□□□ -1.02
ATG4P53867 STE4YOR212W 1272 nt8.66□□□□□ -1.02
ATG4P53867 YPL222C-AYPL222C-A 246 nt8.66□□□□□ -1.02
ATG4P53867 GID7YCL039W 2238 nt8.66□□□□□ -1.02
ATG4P53867 YLR349WYLR349W 507 nt8.65□□□□□ -1.02
ATG4P53867 FUN14YAL008W 597 nt8.63□□□□□ -1.03
ATG4P53867 YJL195CYJL195C 702 nt8.62□□□□□ -1.03
ATG4P53867 YNR029CYNR029C 1290 nt8.61□□□□□ -1.03
ATG4P53867 ADH1YOL086C 1047 nt8.61□□□□□ -1.03
ATG4P53867 DIF1YLR437C 402 nt8.6□□□□□ -1.03
ATG4P53867 YPI1YFR003C 468 nt8.59□□□□□ -1.03
ATG4P53867 YAR028WYAR028W 705 nt8.59□□□□□ -1.03
ATG4P53867 GND1YHR183W 1470 nt8.58□□□□□ -1.04
ATG4P53867 CSM2YIL132C 642 nt8.58□□□□□ -1.04
ATG4P53867 LOT5YKL183W 921 nt8.58□□□□□ -1.04
ATG4P53867 ZTA1YBR046C 1005 nt8.58□□□□□ -1.04
ATG4P53867 ALP1YNL270C 1722 nt8.57□□□□□ -1.04
ATG4P53867 UTR1YJR049C 1593 nt8.56□□□□□ -1.04
ATG4P53867 YKR005CYKR005C 1578 nt8.56□□□□□ -1.04
ATG4P53867 ADH7YCR105W 1086 nt8.56□□□□□ -1.04
ATG4P53867 YGR259CYGR259C 441 nt8.56□□□□□ -1.04
ATG4P53867 BSP1YPR171W 1731 nt8.56□□□□□ -1.04
ATG4P53867 MTG2YHR168W 1557 nt8.56□□□□□ -1.04
ATG4P53867 AKR2YOR034C 2250 nt8.55□□□□□ -1.04
ATG4P53867 AAC1YMR056C 930 nt8.54□□□□□ -1.04
ATG4P53867 PRP4YPR178W 1398 nt8.53□□□□□ -1.04
ATG4P53867 PAU15YIR041W 375 nt8.52□□□□□ -1.05
ATG4P53867 MET8YBR213W 825 nt8.52□□□□□ -1.05
ATG4P53867 APT2YDR441C 546 nt8.5□□□□□ -1.05
ATG4P53867 DPS1YLL018C 1674 nt8.49□□□□□ -1.05
ATG4P53867 YEL008WYEL008W 381 nt8.49□□□□□ -1.05
ATG4P53867 SMM1YNR015W 1155 nt8.49□□□□□ -1.05
ATG4P53867 HSL7YBR133C 2484 nt8.48□□□□□ -1.05
ATG4P53867 NAR1YNL240C 1476 nt8.48□□□□□ -1.05
ATG4P53867 FCY21YER060W 1587 nt8.48□□□□□ -1.05
ATG4P53867 YAT1YAR035W 2064 nt8.47□□□□□ -1.05
ATG4P53867 GPN2YOR262W 1044 nt8.47□□□□□ -1.05
ATG4P53867 NPP1YCR026C 2229 nt8.46□□□□□ -1.05
ATG4P53867 MET2YNL277W 1461 nt8.46□□□□□ -1.05
ATG4P53867 RDN25-1RDN25-1 3396 nt8.45□□□□□ -1.06
ATG4P53867 RDN25-2RDN25-2 3396 nt8.45□□□□□ -1.06
ATG4P53867 SAM35YHR083W 990 nt8.45□□□□□ -1.06
ATG4P53867 ESBP6YNL125C 2022 nt8.45□□□□□ -1.06
ATG4P53867 LSB3YFR024C-A 1380 nt8.45□□□□□ -1.06
ATG4P53867 BIO5YNR056C 1686 nt8.44□□□□□ -1.06
ATG4P53867 SNF1YDR477W 1902 nt8.44□□□□□ -1.06
ATG4P53867 SFP1YLR403W 2052 nt8.44□□□□□ -1.06
ATG4P53867 SED1YDR077W 1017 nt8.43□□□□□ -1.06
ATG4P53867 CPD1YGR247W 720 nt8.43□□□□□ -1.06
ATG4P53867 PRM5YIL117C 957 nt8.43□□□□□ -1.06
ATG4P53867 BMT6YLR063W 1098 nt8.43□□□□□ -1.06
ATG4P53867 RIB2YOL066C 1776 nt8.43□□□□□ -1.06
ATG4P53867 YER190C-AYER190C-A 576 nt8.42□□□□□ -1.06
ATG4P53867 YGR296C-AYGR296C-A 576 nt8.42□□□□□ -1.06
ATG4P53867 YML133W-AYML133W-A 576 nt8.42□□□□□ -1.06
ATG4P53867 YNL339W-AYNL339W-A 576 nt8.42□□□□□ -1.06
ATG4P53867 YPL283W-AYPL283W-A 576 nt8.42□□□□□ -1.06
ATG4P53867 HEL2YDR266C 1920 nt8.41□□□□□ -1.06
ATG4P53867 PRY1YJL079C 900 nt8.41□□□□□ -1.06
ATG4P53867 UGA4YDL210W 1716 nt8.4□□□□□ -1.06
ATG4P53867 PBP1YGR178C 2169 nt8.39□□□□□ -1.07
ATG4P53867 HXT12YIL170W 1374 nt8.38□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms