Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 ARP6YLR085C 1317 nt8.69□□□□□ -1.02
UFD1P53044 NAT4YMR069W 858 nt8.66□□□□□ -1.02
UFD1P53044 PLB1YMR008C 1995 nt8.64□□□□□ -1.03
UFD1P53044 MAE1YKL029C 2010 nt8.64□□□□□ -1.03
UFD1P53044 HMG2YLR450W 3138 nt8.62□□□□□ -1.03
UFD1P53044 TIR3YIL011W 810 nt8.62□□□□□ -1.03
UFD1P53044 TPO4YOR273C 1980 nt8.61□□□□□ -1.03
UFD1P53044 SPT20YOL148C 1815 nt8.6□□□□□ -1.03
UFD1P53044 YDR010CYDR010C 333 nt8.6□□□□□ -1.03
UFD1P53044 LSC2YGR244C 1284 nt8.59□□□□□ -1.03
UFD1P53044 MIR1YJR077C 936 nt8.59□□□□□ -1.03
UFD1P53044 SHH4YLR164W 507 nt8.59□□□□□ -1.03
UFD1P53044 SHB17YKR043C 816 nt8.58□□□□□ -1.04
UFD1P53044 RIM8YGL045W 1629 nt8.58□□□□□ -1.04
UFD1P53044 INA1YLR413W 2028 nt8.58□□□□□ -1.04
UFD1P53044 ALD4YOR374W 1560 nt8.57□□□□□ -1.04
UFD1P53044 THI74YDR438W 1113 nt8.57□□□□□ -1.04
UFD1P53044 HIF1YLL022C 1158 nt8.56□□□□□ -1.04
UFD1P53044 MSF1YPR047W 1410 nt8.55□□□□□ -1.04
UFD1P53044 UGA4YDL210W 1716 nt8.55□□□□□ -1.04
UFD1P53044 ESBP6YNL125C 2022 nt8.55□□□□□ -1.04
UFD1P53044 POM34YLR018C 900 nt8.54□□□□□ -1.04
UFD1P53044 GAP1YKR039W 1809 nt8.53□□□□□ -1.04
UFD1P53044 SFA1YDL168W 1161 nt8.53□□□□□ -1.04
UFD1P53044 PRO1YDR300C 1287 nt8.53□□□□□ -1.04
UFD1P53044 RET2YFR051C 1641 nt8.52□□□□□ -1.05
UFD1P53044 PRM5YIL117C 957 nt8.52□□□□□ -1.05
UFD1P53044 UTR1YJR049C 1593 nt8.52□□□□□ -1.05
UFD1P53044 UBA4YHR111W 1323 nt8.52□□□□□ -1.05
UFD1P53044 RPC82YPR190C 1965 nt8.51□□□□□ -1.05
UFD1P53044 YHL019W-AYHL019W-A 594 nt8.49□□□□□ -1.05
UFD1P53044 YML089CYML089C 369 nt8.49□□□□□ -1.05
UFD1P53044 ILV2YMR108W 2064 nt8.49□□□□□ -1.05
UFD1P53044 YCR087WYCR087W 516 nt8.48□□□□□ -1.05
UFD1P53044 YGL114WYGL114W 2178 nt8.48□□□□□ -1.05
UFD1P53044 URA8YJR103W 1737 nt8.47□□□□□ -1.05
UFD1P53044 YSR3YKR053C 1215 nt8.47□□□□□ -1.05
UFD1P53044 SAM35YHR083W 990 nt8.46□□□□□ -1.06
UFD1P53044 ATG15YCR068W 1563 nt8.46□□□□□ -1.06
UFD1P53044 PHO89YBR296C 1725 nt8.46□□□□□ -1.06
UFD1P53044 TOM6YOR045W 186 nt8.45□□□□□ -1.06
UFD1P53044 ZRT3YKL175W 1512 nt8.44□□□□□ -1.06
UFD1P53044 FRE6YLL051C 2139 nt8.44□□□□□ -1.06
UFD1P53044 GTB1YDR221W 2109 nt8.42□□□□□ -1.06
UFD1P53044 ACO2YJL200C 2370 nt8.41□□□□□ -1.06
UFD1P53044 YGL034CYGL034C 366 nt8.41□□□□□ -1.06
UFD1P53044 MRP20YDR405W 792 nt8.4□□□□□ -1.06
UFD1P53044 DIF1YLR437C 402 nt8.4□□□□□ -1.06
UFD1P53044 COQ2YNR041C 1119 nt8.4□□□□□ -1.06
UFD1P53044 TIF6YPR016C 738 nt8.39□□□□□ -1.07
UFD1P53044 DTR1YBR180W 1719 nt8.39□□□□□ -1.07
UFD1P53044 SBA1YKL117W 651 nt8.38□□□□□ -1.07
UFD1P53044 PEX2YJL210W 816 nt8.37□□□□□ -1.07
UFD1P53044 HIP1YGR191W 1812 nt8.37□□□□□ -1.07
UFD1P53044 XYL2YLR070C 1071 nt8.36□□□□□ -1.07
UFD1P53044 AIM45YPR004C 1035 nt8.35□□□□□ -1.07
UFD1P53044 BSP1YPR171W 1731 nt8.34□□□□□ -1.07
UFD1P53044 CLB6YGR109C 1143 nt8.34□□□□□ -1.07
UFD1P53044 RFC1YOR217W 2586 nt8.33□□□□□ -1.08
UFD1P53044 GAL2YLR081W 1725 nt8.32□□□□□ -1.08
UFD1P53044 DBP1YPL119C 1854 nt8.32□□□□□ -1.08
UFD1P53044 RPL4BYDR012W 1089 nt8.31□□□□□ -1.08
UFD1P53044 MET28YIR017C 564 nt8.31□□□□□ -1.08
UFD1P53044 RPL4AYBR031W 1089 nt8.31□□□□□ -1.08
UFD1P53044 YJL067WYJL067W 351 nt8.3□□□□□ -1.08
UFD1P53044 YAR028WYAR028W 705 nt8.3□□□□□ -1.08
UFD1P53044 UTH1YKR042W 1098 nt8.29□□□□□ -1.08
UFD1P53044 GLR1YPL091W 1452 nt8.28□□□□□ -1.08
UFD1P53044 THI72YOR192C 1800 nt8.28□□□□□ -1.08
UFD1P53044 MUP1YGR055W 1725 nt8.28□□□□□ -1.08
UFD1P53044 HXT1YHR094C 1713 nt8.28□□□□□ -1.08
UFD1P53044 NRT1YOR071C 1797 nt8.27□□□□□ -1.08
UFD1P53044 RBG1YAL036C 1110 nt8.27□□□□□ -1.09
UFD1P53044 HOL1YNR055C 1761 nt8.25□□□□□ -1.09
UFD1P53044 RPS14BYJL191W 417 nt8.25□□□□□ -1.09
UFD1P53044 MTG2YHR168W 1557 nt8.25□□□□□ -1.09
UFD1P53044 ILV3YJR016C 1758 nt8.24□□□□□ -1.09
UFD1P53044 SED1YDR077W 1017 nt8.23□□□□□ -1.09
UFD1P53044 TOK1YJL093C 2076 nt8.23□□□□□ -1.09
UFD1P53044 YER190C-AYER190C-A 576 nt8.22□□□□□ -1.09
UFD1P53044 SHY1YGR112W 1170 nt8.22□□□□□ -1.09
UFD1P53044 YGR296C-AYGR296C-A 576 nt8.22□□□□□ -1.09
UFD1P53044 YML133W-AYML133W-A 576 nt8.22□□□□□ -1.09
UFD1P53044 LIP1YMR298W 453 nt8.22□□□□□ -1.09
UFD1P53044 YNL339W-AYNL339W-A 576 nt8.22□□□□□ -1.09
UFD1P53044 FIT3YOR383C 615 nt8.22□□□□□ -1.09
UFD1P53044 YPL283W-AYPL283W-A 576 nt8.22□□□□□ -1.09
UFD1P53044 YBL086CYBL086C 1401 nt8.21□□□□□ -1.09
UFD1P53044 YMR244WYMR244W 1068 nt8.21□□□□□ -1.1
UFD1P53044 ZTA1YBR046C 1005 nt8.2□□□□□ -1.1
UFD1P53044 ALP1YNL270C 1722 nt8.2□□□□□ -1.1
UFD1P53044 AKR2YOR034C 2250 nt8.19□□□□□ -1.1
UFD1P53044 YNL024CYNL024C 741 nt8.19□□□□□ -1.1
UFD1P53044 YIL100C-AYIL100C-A 339 nt8.17□□□□□ -1.1
UFD1P53044 YMR226CYMR226C 804 nt8.16□□□□□ -1.1
UFD1P53044 LEU9YOR108W 1815 nt8.16□□□□□ -1.1
UFD1P53044 TSC10YBR265W 963 nt8.16□□□□□ -1.1
UFD1P53044 SDH5YOL071W 489 nt8.14□□□□□ -1.11
UFD1P53044 UFO1YML088W 2007 nt8.13□□□□□ -1.11
UFD1P53044 URA6YKL024C 615 nt8.13□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 8.2 ms