Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 PBP1YGR178C 2169 nt7.9□□□□□ -1.14
VPS55P47111 GLR1YPL091W 1452 nt7.9□□□□□ -1.14
VPS55P47111 LSC2YGR244C 1284 nt7.9□□□□□ -1.14
VPS55P47111 CMP2YML057W 1815 nt7.89□□□□□ -1.15
VPS55P47111 RTN2YDL204W 1182 nt7.88□□□□□ -1.15
VPS55P47111 SHH4YLR164W 507 nt7.88□□□□□ -1.15
VPS55P47111 RPL4BYDR012W 1089 nt7.87□□□□□ -1.15
VPS55P47111 YML089CYML089C 369 nt7.87□□□□□ -1.15
VPS55P47111 RPL4AYBR031W 1089 nt7.87□□□□□ -1.15
VPS55P47111 ARP6YLR085C 1317 nt7.86□□□□□ -1.15
VPS55P47111 CLB6YGR109C 1143 nt7.86□□□□□ -1.15
VPS55P47111 CYT2YKL087C 675 nt7.86□□□□□ -1.15
VPS55P47111 POM34YLR018C 900 nt7.86□□□□□ -1.15
VPS55P47111 YMR244WYMR244W 1068 nt7.86□□□□□ -1.15
VPS55P47111 BIO5YNR056C 1686 nt7.85□□□□□ -1.15
VPS55P47111 PRP4YPR178W 1398 nt7.84□□□□□ -1.15
VPS55P47111 YKR005CYKR005C 1578 nt7.84□□□□□ -1.15
VPS55P47111 TOM6YOR045W 186 nt7.84□□□□□ -1.15
VPS55P47111 PRO1YDR300C 1287 nt7.83□□□□□ -1.16
VPS55P47111 YGR259CYGR259C 441 nt7.83□□□□□ -1.16
VPS55P47111 UTH1YKR042W 1098 nt7.82□□□□□ -1.16
VPS55P47111 DPS1YLL018C 1674 nt7.82□□□□□ -1.16
VPS55P47111 ATG15YCR068W 1563 nt7.8□□□□□ -1.16
VPS55P47111 BMT6YLR063W 1098 nt7.8□□□□□ -1.16
VPS55P47111 HIP1YGR191W 1812 nt7.8□□□□□ -1.16
VPS55P47111 RPS14BYJL191W 417 nt7.79□□□□□ -1.16
VPS55P47111 PEX2YJL210W 816 nt7.79□□□□□ -1.16
VPS55P47111 YMR226CYMR226C 804 nt7.78□□□□□ -1.16
VPS55P47111 PLB1YMR008C 1995 nt7.78□□□□□ -1.16
VPS55P47111 GAP1YKR039W 1809 nt7.78□□□□□ -1.16
VPS55P47111 MET28YIR017C 564 nt7.77□□□□□ -1.17
VPS55P47111 NRT1YOR071C 1797 nt7.76□□□□□ -1.17
VPS55P47111 HEL2YDR266C 1920 nt7.76□□□□□ -1.17
VPS55P47111 TIF6YPR016C 738 nt7.76□□□□□ -1.17
VPS55P47111 SNF1YDR477W 1902 nt7.76□□□□□ -1.17
VPS55P47111 RBG2YGR173W 1107 nt7.75□□□□□ -1.17
VPS55P47111 SDH5YOL071W 489 nt7.74□□□□□ -1.17
VPS55P47111 YLR111WYLR111W 333 nt7.73□□□□□ -1.17
VPS55P47111 TSC10YBR265W 963 nt7.72□□□□□ -1.17
VPS55P47111 IRC24YIR036C 792 nt7.71□□□□□ -1.18
VPS55P47111 FIT3YOR383C 615 nt7.71□□□□□ -1.18
VPS55P47111 RAD23YEL037C 1197 nt7.69□□□□□ -1.18
VPS55P47111 UTR1YJR049C 1593 nt7.67□□□□□ -1.18
VPS55P47111 YGR012WYGR012W 1182 nt7.66□□□□□ -1.18
VPS55P47111 SAM35YHR083W 990 nt7.66□□□□□ -1.18
VPS55P47111 DIF1YLR437C 402 nt7.66□□□□□ -1.18
VPS55P47111 YAT1YAR035W 2064 nt7.65□□□□□ -1.18
VPS55P47111 YAR028WYAR028W 705 nt7.64□□□□□ -1.19
VPS55P47111 YLR279WYLR279W 390 nt7.63□□□□□ -1.19
VPS55P47111 ALP1YNL270C 1722 nt7.61□□□□□ -1.19
VPS55P47111 RIB3YDR487C 627 nt7.6□□□□□ -1.19
VPS55P47111 PRM5YIL117C 957 nt7.6□□□□□ -1.19
VPS55P47111 YLR437C-AYLR437C-A 228 nt7.58□□□□□ -1.2
VPS55P47111 MTG2YHR168W 1557 nt7.58□□□□□ -1.2
VPS55P47111 MSB4YOL112W 1479 nt7.57□□□□□ -1.2
VPS55P47111 AKR2YOR034C 2250 nt7.57□□□□□ -1.2
VPS55P47111 YPL222C-AYPL222C-A 246 nt7.57□□□□□ -1.2
VPS55P47111 ALD4YOR374W 1560 nt7.55□□□□□ -1.2
VPS55P47111 SAM1YLR180W 1149 nt7.54□□□□□ -1.2
VPS55P47111 ZTA1YBR046C 1005 nt7.54□□□□□ -1.2
VPS55P47111 SED1YDR077W 1017 nt7.53□□□□□ -1.2
VPS55P47111 CAB5YDR196C 726 nt7.52□□□□□ -1.21
VPS55P47111 SPT20YOL148C 1815 nt7.52□□□□□ -1.21
VPS55P47111 SFP1YLR403W 2052 nt7.5□□□□□ -1.21
VPS55P47111 LIP1YMR298W 453 nt7.49□□□□□ -1.21
VPS55P47111 MET2YNL277W 1461 nt7.49□□□□□ -1.21
VPS55P47111 RIM8YGL045W 1629 nt7.49□□□□□ -1.21
VPS55P47111 HIF1YLL022C 1158 nt7.48□□□□□ -1.21
VPS55P47111 RPM1RPM1 483 nt7.48□□□□□ -1.21
VPS55P47111 DBP1YPL119C 1854 nt7.48□□□□□ -1.21
VPS55P47111 GND1YHR183W 1470 nt7.48□□□□□ -1.21
VPS55P47111 MAE1YKL029C 2010 nt7.47□□□□□ -1.21
VPS55P47111 HXT1YHR094C 1713 nt7.47□□□□□ -1.21
VPS55P47111 YER190C-AYER190C-A 576 nt7.47□□□□□ -1.21
VPS55P47111 YGR296C-AYGR296C-A 576 nt7.47□□□□□ -1.21
VPS55P47111 YML133W-AYML133W-A 576 nt7.47□□□□□ -1.21
VPS55P47111 YNL339W-AYNL339W-A 576 nt7.47□□□□□ -1.21
VPS55P47111 YPL283W-AYPL283W-A 576 nt7.47□□□□□ -1.21
VPS55P47111 YGL114WYGL114W 2178 nt7.46□□□□□ -1.22
VPS55P47111 FCY21YER060W 1587 nt7.46□□□□□ -1.22
VPS55P47111 APT2YDR441C 546 nt7.45□□□□□ -1.22
VPS55P47111 YPI1YFR003C 468 nt7.45□□□□□ -1.22
VPS55P47111 LOT5YKL183W 921 nt7.45□□□□□ -1.22
VPS55P47111 YBL086CYBL086C 1401 nt7.42□□□□□ -1.22
VPS55P47111 SMM1YNR015W 1155 nt7.41□□□□□ -1.22
VPS55P47111 LEU9YOR108W 1815 nt7.41□□□□□ -1.22
VPS55P47111 RPC82YPR190C 1965 nt7.4□□□□□ -1.23
VPS55P47111 NPP1YCR026C 2229 nt7.39□□□□□ -1.23
VPS55P47111 YPL251WYPL251W 303 nt7.39□□□□□ -1.23
VPS55P47111 BRR1YPR057W 1026 nt7.39□□□□□ -1.23
VPS55P47111 UGA4YDL210W 1716 nt7.38□□□□□ -1.23
VPS55P47111 TOA2YKL058W 369 nt7.38□□□□□ -1.23
VPS55P47111 ADH1YOL086C 1047 nt7.38□□□□□ -1.23
VPS55P47111 ZRT3YKL175W 1512 nt7.37□□□□□ -1.23
VPS55P47111 YJL195CYJL195C 702 nt7.37□□□□□ -1.23
VPS55P47111 HMG2YLR450W 3138 nt7.37□□□□□ -1.23
VPS55P47111 MEP3YPR138C 1470 nt7.36□□□□□ -1.23
VPS55P47111 LSB3YFR024C-A 1380 nt7.36□□□□□ -1.23
VPS55P47111 SHY1YGR112W 1170 nt7.36□□□□□ -1.23
VPS55P47111 PRY1YJL079C 900 nt7.36□□□□□ -1.23
Retrieved 100 of 7,029 protein–RNA pairs in 30.4 ms