Protein–RNA interactions for Protein: P40489

XBP1, Transcriptional repressor XBP1, yeastyeast

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XBP1P40489 IRC24YIR036C 792 nt8.86□□□□□ -0.99
XBP1P40489 YLR111WYLR111W 333 nt8.85□□□□□ -0.99
XBP1P40489 RPL4BYDR012W 1089 nt8.84□□□□□ -0.99
XBP1P40489 CLB6YGR109C 1143 nt8.84□□□□□ -0.99
XBP1P40489 RPL4AYBR031W 1089 nt8.84□□□□□ -0.99
XBP1P40489 SFA1YDL168W 1161 nt8.83□□□□□ -1
XBP1P40489 YHL019W-AYHL019W-A 594 nt8.82□□□□□ -1
XBP1P40489 AQY2YLL052C 450 nt8.81□□□□□ -1
XBP1P40489 DUT1YBR252W 444 nt8.81□□□□□ -1
XBP1P40489 STR3YGL184C 1398 nt8.81□□□□□ -1
XBP1P40489 RDN18-1RDN18-1 1800 nt8.8□□□□□ -1
XBP1P40489 RDN18-2RDN18-2 1800 nt8.8□□□□□ -1
XBP1P40489 TIR3YIL011W 810 nt8.79□□□□□ -1
XBP1P40489 SAM1YLR180W 1149 nt8.78□□□□□ -1
XBP1P40489 SDH5YOL071W 489 nt8.78□□□□□ -1
XBP1P40489 UTH1YKR042W 1098 nt8.76□□□□□ -1.01
XBP1P40489 NBP35YGL091C 987 nt8.75□□□□□ -1.01
XBP1P40489 CYT2YKL087C 675 nt8.75□□□□□ -1.01
XBP1P40489 RPS14BYJL191W 417 nt8.74□□□□□ -1.01
XBP1P40489 PBP1YGR178C 2169 nt8.73□□□□□ -1.01
XBP1P40489 RAD23YEL037C 1197 nt8.73□□□□□ -1.01
XBP1P40489 YML089CYML089C 369 nt8.71□□□□□ -1.02
XBP1P40489 RTN2YDL204W 1182 nt8.69□□□□□ -1.02
XBP1P40489 LSC2YGR244C 1284 nt8.69□□□□□ -1.02
XBP1P40489 TOM6YOR045W 186 nt8.69□□□□□ -1.02
XBP1P40489 TSC10YBR265W 963 nt8.69□□□□□ -1.02
XBP1P40489 SHH4YLR164W 507 nt8.68□□□□□ -1.02
XBP1P40489 POM34YLR018C 900 nt8.67□□□□□ -1.02
XBP1P40489 NRT1YOR071C 1797 nt8.67□□□□□ -1.02
XBP1P40489 HIP1YGR191W 1812 nt8.66□□□□□ -1.02
XBP1P40489 RPM1RPM1 483 nt8.66□□□□□ -1.02
XBP1P40489 PEX2YJL210W 816 nt8.65□□□□□ -1.02
XBP1P40489 YGR012WYGR012W 1182 nt8.64□□□□□ -1.03
XBP1P40489 MET28YIR017C 564 nt8.64□□□□□ -1.03
XBP1P40489 PRO1YDR300C 1287 nt8.62□□□□□ -1.03
XBP1P40489 CMP2YML057W 1815 nt8.61□□□□□ -1.03
XBP1P40489 ATG15YCR068W 1563 nt8.61□□□□□ -1.03
XBP1P40489 RIB3YDR487C 627 nt8.61□□□□□ -1.03
XBP1P40489 YLR437C-AYLR437C-A 228 nt8.61□□□□□ -1.03
XBP1P40489 FIT3YOR383C 615 nt8.59□□□□□ -1.03
XBP1P40489 TIF6YPR016C 738 nt8.59□□□□□ -1.03
XBP1P40489 ARP6YLR085C 1317 nt8.56□□□□□ -1.04
XBP1P40489 YLR279WYLR279W 390 nt8.54□□□□□ -1.04
XBP1P40489 YPL222C-AYPL222C-A 246 nt8.54□□□□□ -1.04
XBP1P40489 YAT1YAR035W 2064 nt8.53□□□□□ -1.04
XBP1P40489 PLB1YMR008C 1995 nt8.53□□□□□ -1.04
XBP1P40489 GAP1YKR039W 1809 nt8.52□□□□□ -1.05
XBP1P40489 STE4YOR212W 1272 nt8.5□□□□□ -1.05
XBP1P40489 PRM5YIL117C 957 nt8.48□□□□□ -1.05
XBP1P40489 FUN14YAL008W 597 nt8.48□□□□□ -1.05
XBP1P40489 HIF1YLL022C 1158 nt8.48□□□□□ -1.05
XBP1P40489 ALD4YOR374W 1560 nt8.48□□□□□ -1.05
XBP1P40489 MSB4YOL112W 1479 nt8.47□□□□□ -1.05
XBP1P40489 CAB5YDR196C 726 nt8.47□□□□□ -1.05
XBP1P40489 YPI1YFR003C 468 nt8.47□□□□□ -1.05
XBP1P40489 YJL195CYJL195C 702 nt8.47□□□□□ -1.05
XBP1P40489 NME1NME1 340 nt8.45□□□□□ -1.06
XBP1P40489 RAD51YER095W 1203 nt8.44□□□□□ -1.06
XBP1P40489 INA1YLR413W 2028 nt8.43□□□□□ -1.06
XBP1P40489 YLR349WYLR349W 507 nt8.43□□□□□ -1.06
XBP1P40489 YAR028WYAR028W 705 nt8.42□□□□□ -1.06
XBP1P40489 YNR029CYNR029C 1290 nt8.42□□□□□ -1.06
XBP1P40489 ADH1YOL086C 1047 nt8.42□□□□□ -1.06
XBP1P40489 ALP1YNL270C 1722 nt8.42□□□□□ -1.06
XBP1P40489 GND1YHR183W 1470 nt8.41□□□□□ -1.06
XBP1P40489 LOT5YKL183W 921 nt8.41□□□□□ -1.06
XBP1P40489 ADH7YCR105W 1086 nt8.4□□□□□ -1.06
XBP1P40489 YGR139WYGR139W 339 nt8.4□□□□□ -1.06
XBP1P40489 SPT20YOL148C 1815 nt8.4□□□□□ -1.07
XBP1P40489 DIF1YLR437C 402 nt8.39□□□□□ -1.07
XBP1P40489 UTR1YJR049C 1593 nt8.39□□□□□ -1.07
XBP1P40489 SAM35YHR083W 990 nt8.38□□□□□ -1.07
XBP1P40489 PAU15YIR041W 375 nt8.37□□□□□ -1.07
XBP1P40489 AKR2YOR034C 2250 nt8.36□□□□□ -1.07
XBP1P40489 YEL008WYEL008W 381 nt8.35□□□□□ -1.07
XBP1P40489 RPC82YPR190C 1965 nt8.35□□□□□ -1.07
XBP1P40489 MTG2YHR168W 1557 nt8.34□□□□□ -1.07
XBP1P40489 ZTA1YBR046C 1005 nt8.32□□□□□ -1.08
XBP1P40489 ZRT3YKL175W 1512 nt8.31□□□□□ -1.08
XBP1P40489 APT2YDR441C 546 nt8.3□□□□□ -1.08
XBP1P40489 CPD1YGR247W 720 nt8.3□□□□□ -1.08
XBP1P40489 SMM1YNR015W 1155 nt8.3□□□□□ -1.08
XBP1P40489 GPN2YOR262W 1044 nt8.29□□□□□ -1.08
XBP1P40489 LSB3YFR024C-A 1380 nt8.29□□□□□ -1.08
XBP1P40489 FCY21YER060W 1587 nt8.29□□□□□ -1.08
XBP1P40489 SED1YDR077W 1017 nt8.26□□□□□ -1.09
XBP1P40489 tS(GCU)LtS(GCU)L 80 nt8.24□□□□□ -1.09
XBP1P40489 HSL7YBR133C 2484 nt8.24□□□□□ -1.09
XBP1P40489 HXT1YHR094C 1713 nt8.21□□□□□ -1.09
XBP1P40489 RIB2YOL066C 1776 nt8.21□□□□□ -1.1
XBP1P40489 YJL067WYJL067W 351 nt8.21□□□□□ -1.1
XBP1P40489 PRY1YJL079C 900 nt8.21□□□□□ -1.1
XBP1P40489 ESS1YJR017C 513 nt8.21□□□□□ -1.1
XBP1P40489 FRE6YLL051C 2139 nt8.21□□□□□ -1.1
XBP1P40489 LIP1YMR298W 453 nt8.2□□□□□ -1.1
XBP1P40489 HXT12YIL170W 1374 nt8.2□□□□□ -1.1
XBP1P40489 VRG4YGL225W 1014 nt8.19□□□□□ -1.1
XBP1P40489 RIM8YGL045W 1629 nt8.18□□□□□ -1.1
XBP1P40489 YER190C-AYER190C-A 576 nt8.16□□□□□ -1.1
XBP1P40489 YGR296C-AYGR296C-A 576 nt8.16□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 10.6 ms