Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 SHH4YLR164W 507 nt8.37□□□□□ -1.07
CUE1P38428 PLB1YMR008C 1995 nt8.36□□□□□ -1.07
CUE1P38428 SBA1YKL117W 651 nt8.36□□□□□ -1.07
CUE1P38428 PAU7YAR020C 168 nt8.36□□□□□ -1.07
CUE1P38428 MET2YNL277W 1461 nt8.36□□□□□ -1.07
CUE1P38428 RIM8YGL045W 1629 nt8.36□□□□□ -1.07
CUE1P38428 YGL114WYGL114W 2178 nt8.35□□□□□ -1.07
CUE1P38428 TIR3YIL011W 810 nt8.35□□□□□ -1.07
CUE1P38428 SHB17YKR043C 816 nt8.35□□□□□ -1.07
CUE1P38428 INA1YLR413W 2028 nt8.34□□□□□ -1.07
CUE1P38428 THI74YDR438W 1113 nt8.33□□□□□ -1.08
CUE1P38428 MSF1YPR047W 1410 nt8.32□□□□□ -1.08
CUE1P38428 MAE1YKL029C 2010 nt8.31□□□□□ -1.08
CUE1P38428 LSC2YGR244C 1284 nt8.31□□□□□ -1.08
CUE1P38428 SFA1YDL168W 1161 nt8.3□□□□□ -1.08
CUE1P38428 POM34YLR018C 900 nt8.3□□□□□ -1.08
CUE1P38428 RET2YFR051C 1641 nt8.29□□□□□ -1.08
CUE1P38428 RPC82YPR190C 1965 nt8.28□□□□□ -1.08
CUE1P38428 UBA4YHR111W 1323 nt8.28□□□□□ -1.08
CUE1P38428 PRO1YDR300C 1287 nt8.26□□□□□ -1.09
CUE1P38428 SSN3YPL042C 1668 nt8.26□□□□□ -1.09
CUE1P38428 PRM5YIL117C 957 nt8.25□□□□□ -1.09
CUE1P38428 GAP1YKR039W 1809 nt8.24□□□□□ -1.09
CUE1P38428 UTR1YJR049C 1593 nt8.24□□□□□ -1.09
CUE1P38428 YHL019W-AYHL019W-A 594 nt8.24□□□□□ -1.09
CUE1P38428 SFP1YLR403W 2052 nt8.24□□□□□ -1.09
CUE1P38428 BSP1YPR171W 1731 nt8.21□□□□□ -1.09
CUE1P38428 YML089CYML089C 369 nt8.21□□□□□ -1.1
CUE1P38428 PHO89YBR296C 1725 nt8.2□□□□□ -1.1
CUE1P38428 HIF1YLL022C 1158 nt8.19□□□□□ -1.1
CUE1P38428 TOM6YOR045W 186 nt8.19□□□□□ -1.1
CUE1P38428 YSR3YKR053C 1215 nt8.18□□□□□ -1.1
CUE1P38428 COQ2YNR041C 1119 nt8.18□□□□□ -1.1
CUE1P38428 ATG15YCR068W 1563 nt8.18□□□□□ -1.1
CUE1P38428 MUP1YGR055W 1725 nt8.17□□□□□ -1.1
CUE1P38428 YGL034CYGL034C 366 nt8.17□□□□□ -1.1
CUE1P38428 ALD4YOR374W 1560 nt8.16□□□□□ -1.1
CUE1P38428 TIF6YPR016C 738 nt8.16□□□□□ -1.1
CUE1P38428 DIF1YLR437C 402 nt8.15□□□□□ -1.1
CUE1P38428 ACO2YJL200C 2370 nt8.14□□□□□ -1.11
CUE1P38428 NPP1YCR026C 2229 nt8.14□□□□□ -1.11
CUE1P38428 HIP1YGR191W 1812 nt8.13□□□□□ -1.11
CUE1P38428 XYL2YLR070C 1071 nt8.13□□□□□ -1.11
CUE1P38428 YCR087WYCR087W 516 nt8.12□□□□□ -1.11
CUE1P38428 PEX2YJL210W 816 nt8.12□□□□□ -1.11
CUE1P38428 HMG2YLR450W 3138 nt8.09□□□□□ -1.11
CUE1P38428 RBG1YAL036C 1110 nt8.09□□□□□ -1.11
CUE1P38428 AIM45YPR004C 1035 nt8.09□□□□□ -1.11
CUE1P38428 GLR1YPL091W 1452 nt8.08□□□□□ -1.12
CUE1P38428 GID7YCL039W 2238 nt8.08□□□□□ -1.12
CUE1P38428 UGA4YDL210W 1716 nt8.07□□□□□ -1.12
CUE1P38428 MRP20YDR405W 792 nt8.07□□□□□ -1.12
CUE1P38428 SAM35YHR083W 990 nt8.07□□□□□ -1.12
CUE1P38428 TPO4YOR273C 1980 nt8.07□□□□□ -1.12
CUE1P38428 DBP1YPL119C 1854 nt8.06□□□□□ -1.12
CUE1P38428 YMR244WYMR244W 1068 nt8.06□□□□□ -1.12
CUE1P38428 HOL1YNR055C 1761 nt8.06□□□□□ -1.12
CUE1P38428 RPL4BYDR012W 1089 nt8.04□□□□□ -1.12
CUE1P38428 MET28YIR017C 564 nt8.04□□□□□ -1.12
CUE1P38428 RPS14BYJL191W 417 nt8.04□□□□□ -1.12
CUE1P38428 RPL4AYBR031W 1089 nt8.04□□□□□ -1.12
CUE1P38428 YAR028WYAR028W 705 nt8.03□□□□□ -1.12
CUE1P38428 UTH1YKR042W 1098 nt8.02□□□□□ -1.13
CUE1P38428 NRT1YOR071C 1797 nt8.01□□□□□ -1.13
CUE1P38428 MTG2YHR168W 1557 nt8.01□□□□□ -1.13
CUE1P38428 YBL086CYBL086C 1401 nt7.98□□□□□ -1.13
CUE1P38428 CLB6YGR109C 1143 nt7.98□□□□□ -1.13
CUE1P38428 ZTA1YBR046C 1005 nt7.98□□□□□ -1.13
CUE1P38428 ZRT3YKL175W 1512 nt7.98□□□□□ -1.13
CUE1P38428 HXT1YHR094C 1713 nt7.98□□□□□ -1.13
CUE1P38428 YER190C-AYER190C-A 576 nt7.97□□□□□ -1.13
CUE1P38428 YGR296C-AYGR296C-A 576 nt7.97□□□□□ -1.13
CUE1P38428 YML133W-AYML133W-A 576 nt7.97□□□□□ -1.13
CUE1P38428 YNL339W-AYNL339W-A 576 nt7.97□□□□□ -1.13
CUE1P38428 YPL283W-AYPL283W-A 576 nt7.97□□□□□ -1.13
CUE1P38428 SED1YDR077W 1017 nt7.95□□□□□ -1.14
CUE1P38428 SHY1YGR112W 1170 nt7.95□□□□□ -1.14
CUE1P38428 FIT3YOR383C 615 nt7.95□□□□□ -1.14
CUE1P38428 RBG2YGR173W 1107 nt7.94□□□□□ -1.14
CUE1P38428 YJL067WYJL067W 351 nt7.94□□□□□ -1.14
CUE1P38428 YRF1-2YER190W 5046 nt7.94□□□□□ -1.14
CUE1P38428 YMR209CYMR209C 1374 nt7.94□□□□□ -1.14
CUE1P38428 AKR2YOR034C 2250 nt7.94□□□□□ -1.14
CUE1P38428 LIP1YMR298W 453 nt7.93□□□□□ -1.14
CUE1P38428 YHL008CYHL008C 1884 nt7.93□□□□□ -1.14
CUE1P38428 ALP1YNL270C 1722 nt7.92□□□□□ -1.14
CUE1P38428 HIS2YFR025C 1008 nt7.91□□□□□ -1.14
CUE1P38428 YPL251WYPL251W 303 nt7.91□□□□□ -1.14
CUE1P38428 LEU9YOR108W 1815 nt7.91□□□□□ -1.14
CUE1P38428 UFO1YML088W 2007 nt7.9□□□□□ -1.14
CUE1P38428 YLR279WYLR279W 390 nt7.9□□□□□ -1.14
CUE1P38428 ILV3YJR016C 1758 nt7.89□□□□□ -1.15
CUE1P38428 YLR111WYLR111W 333 nt7.89□□□□□ -1.15
CUE1P38428 YMR226CYMR226C 804 nt7.89□□□□□ -1.15
CUE1P38428 SDH5YOL071W 489 nt7.88□□□□□ -1.15
CUE1P38428 TSC10YBR265W 963 nt7.88□□□□□ -1.15
CUE1P38428 URA8YJR103W 1737 nt7.88□□□□□ -1.15
CUE1P38428 YNL024CYNL024C 741 nt7.87□□□□□ -1.15
CUE1P38428 URA6YKL024C 615 nt7.86□□□□□ -1.15
CUE1P38428 HXK1YFR053C 1458 nt7.85□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 78.3 ms