Protein–RNA interactions for Protein: P08779

KRT16, Keratin, type I cytoskeletal 16, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT16P08779 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
KRT16P08779 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
KRT16P08779 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
KRT16P08779 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
KRT16P08779 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.71■■□□□ 1.87
KRT16P08779 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
KRT16P08779 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.87
KRT16P08779 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
KRT16P08779 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
KRT16P08779 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
KRT16P08779 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
KRT16P08779 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.68■■□□□ 1.86
KRT16P08779 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
KRT16P08779 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
KRT16P08779 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.65■■□□□ 1.86
KRT16P08779 AC120057.4-201ENST00000624722 1615 ntBASIC26.65■■□□□ 1.86
KRT16P08779 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.64■■□□□ 1.85
KRT16P08779 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
KRT16P08779 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
KRT16P08779 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
KRT16P08779 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
KRT16P08779 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
KRT16P08779 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
KRT16P08779 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
KRT16P08779 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.6■■□□□ 1.85
KRT16P08779 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
KRT16P08779 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
KRT16P08779 ZNRF2P1-201ENST00000441407 443 ntBASIC26.59■■□□□ 1.85
KRT16P08779 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KRT16P08779 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KRT16P08779 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
KRT16P08779 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
KRT16P08779 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
KRT16P08779 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
KRT16P08779 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
KRT16P08779 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.56■■□□□ 1.84
KRT16P08779 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
KRT16P08779 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
KRT16P08779 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.56■■□□□ 1.84
KRT16P08779 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
KRT16P08779 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
KRT16P08779 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
KRT16P08779 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
KRT16P08779 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
KRT16P08779 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
KRT16P08779 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.53■■□□□ 1.84
KRT16P08779 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.53■■□□□ 1.84
KRT16P08779 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
KRT16P08779 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
KRT16P08779 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
KRT16P08779 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
KRT16P08779 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
KRT16P08779 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
KRT16P08779 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.47■■□□□ 1.83
KRT16P08779 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
KRT16P08779 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
KRT16P08779 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.46■■□□□ 1.83
KRT16P08779 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.45■■□□□ 1.82
KRT16P08779 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
KRT16P08779 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
KRT16P08779 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
KRT16P08779 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
KRT16P08779 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.41■■□□□ 1.82
KRT16P08779 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
KRT16P08779 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.39■■□□□ 1.82
KRT16P08779 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.39■■□□□ 1.82
KRT16P08779 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.39■■□□□ 1.82
KRT16P08779 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
KRT16P08779 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KRT16P08779 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KRT16P08779 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.37■■□□□ 1.81
KRT16P08779 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.37■■□□□ 1.81
KRT16P08779 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.36■■□□□ 1.81
KRT16P08779 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
KRT16P08779 AC135731.1-201ENST00000569415 2548 ntBASIC26.35■■□□□ 1.81
KRT16P08779 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KRT16P08779 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.34■■□□□ 1.81
KRT16P08779 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
KRT16P08779 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
KRT16P08779 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
KRT16P08779 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.32■■□□□ 1.8
KRT16P08779 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.31■■□□□ 1.8
KRT16P08779 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT16P08779 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KRT16P08779 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.3■■□□□ 1.8
KRT16P08779 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
KRT16P08779 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
KRT16P08779 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.29■■□□□ 1.8
KRT16P08779 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KRT16P08779 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KRT16P08779 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KRT16P08779 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
KRT16P08779 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
KRT16P08779 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
KRT16P08779 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
KRT16P08779 AC142086.6-201ENST00000621154 1765 ntBASIC26.27■■□□□ 1.8
KRT16P08779 ST7-AS1-201ENST00000456775 1889 ntBASIC26.27■■□□□ 1.8
KRT16P08779 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
KRT16P08779 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
KRT16P08779 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms