Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.3■■■□□ 2.6
TNRC18O15417 CR559946.2-201ENST00000623684 991 ntBASIC31.3■■■□□ 2.6
TNRC18O15417 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
TNRC18O15417 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TNRC18O15417 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.26■■■□□ 2.59
TNRC18O15417 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
TNRC18O15417 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.25■■■□□ 2.59
TNRC18O15417 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.24■■■□□ 2.59
TNRC18O15417 DUX4L29-201ENST00000425409 679 ntBASIC31.23■■■□□ 2.59
TNRC18O15417 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.22■■■□□ 2.59
TNRC18O15417 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
TNRC18O15417 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
TNRC18O15417 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
TNRC18O15417 RARRES2P2-201ENST00000394842 485 ntBASIC31.2■■■□□ 2.59
TNRC18O15417 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC31.2■■■□□ 2.58
TNRC18O15417 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
TNRC18O15417 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TNRC18O15417 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TNRC18O15417 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.15■■■□□ 2.58
TNRC18O15417 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
TNRC18O15417 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.14■■■□□ 2.57
TNRC18O15417 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
TNRC18O15417 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.12■■■□□ 2.57
TNRC18O15417 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TNRC18O15417 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
TNRC18O15417 ABHD17AP5-201ENST00000580133 923 ntBASIC31.11■■■□□ 2.57
TNRC18O15417 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.1■■■□□ 2.57
TNRC18O15417 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.1■■■□□ 2.57
TNRC18O15417 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
TNRC18O15417 AC019069.1-201ENST00000610008 1333 ntBASIC31.09■■■□□ 2.57
TNRC18O15417 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TNRC18O15417 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.08■■■□□ 2.57
TNRC18O15417 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.08■■■□□ 2.57
TNRC18O15417 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
TNRC18O15417 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.08■■■□□ 2.57
TNRC18O15417 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.07■■■□□ 2.56
TNRC18O15417 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
TNRC18O15417 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TNRC18O15417 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
TNRC18O15417 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.04■■■□□ 2.56
TNRC18O15417 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.04■■■□□ 2.56
TNRC18O15417 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.03■■■□□ 2.56
TNRC18O15417 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
TNRC18O15417 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TNRC18O15417 AC021231.2-201ENST00000594613 730 ntBASIC31.02■■■□□ 2.56
TNRC18O15417 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.01■■■□□ 2.56
TNRC18O15417 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
TNRC18O15417 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31■■■□□ 2.55
TNRC18O15417 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31■■■□□ 2.55
TNRC18O15417 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
TNRC18O15417 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
TNRC18O15417 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.98■■■□□ 2.55
TNRC18O15417 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
TNRC18O15417 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
TNRC18O15417 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
TNRC18O15417 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TNRC18O15417 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
TNRC18O15417 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
TNRC18O15417 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TNRC18O15417 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TNRC18O15417 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
TNRC18O15417 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
TNRC18O15417 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.85■■■□□ 2.53
TNRC18O15417 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TNRC18O15417 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TNRC18O15417 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.84■■■□□ 2.53
TNRC18O15417 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
TNRC18O15417 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.82■■■□□ 2.53
TNRC18O15417 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TNRC18O15417 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.79■■■□□ 2.52
TNRC18O15417 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
TNRC18O15417 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
TNRC18O15417 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
TNRC18O15417 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.78■■■□□ 2.52
TNRC18O15417 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.78■■■□□ 2.52
TNRC18O15417 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
TNRC18O15417 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.78■■■□□ 2.52
TNRC18O15417 DUX4L11-201ENST00000611504 1267 ntBASIC30.78■■■□□ 2.52
TNRC18O15417 DUX4L12-201ENST00000614593 1267 ntBASIC30.78■■■□□ 2.52
TNRC18O15417 DUX4L14-201ENST00000621227 1267 ntBASIC30.78■■■□□ 2.52
TNRC18O15417 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
TNRC18O15417 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
TNRC18O15417 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.75■■■□□ 2.51
TNRC18O15417 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
TNRC18O15417 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.74■■■□□ 2.51
TNRC18O15417 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
TNRC18O15417 LINC01971-201ENST00000617888 1048 ntBASIC30.71■■■□□ 2.51
TNRC18O15417 AC012354.3-201ENST00000623734 483 ntBASIC30.7■■■□□ 2.51
TNRC18O15417 AL592295.1-201ENST00000400984 884 ntBASIC30.7■■■□□ 2.5
TNRC18O15417 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TNRC18O15417 AC018358.1-201ENST00000631079 1402 ntBASIC30.67■■■□□ 2.5
TNRC18O15417 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.67■■■□□ 2.5
TNRC18O15417 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.67■■■□□ 2.5
TNRC18O15417 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TNRC18O15417 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TNRC18O15417 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.66■■■□□ 2.5
TNRC18O15417 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
TNRC18O15417 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TNRC18O15417 NTF6A-201ENST00000591175 560 ntBASIC30.65■■■□□ 2.5
TNRC18O15417 RNF126P1-201ENST00000567452 1320 ntBASIC30.65■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms