Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV9-1A0A075B6T8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRAV9-1A0A075B6T8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV9-1A0A075B6T8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV9-1A0A075B6T8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TRAV9-1A0A075B6T8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV9-1A0A075B6T8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV9-1A0A075B6T8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV9-1A0A075B6T8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.61■□□□□ 0.89
TRAV9-1A0A075B6T8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV9-1A0A075B6T8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAV9-1A0A075B6T8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV9-1A0A075B6T8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV9-1A0A075B6T8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRAV9-1A0A075B6T8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRAV9-1A0A075B6T8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV9-1A0A075B6T8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.58■□□□□ 0.88
TRAV9-1A0A075B6T8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV9-1A0A075B6T8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV9-1A0A075B6T8 AC142086.6-201ENST00000621154 1765 ntBASIC20.57■□□□□ 0.88
TRAV9-1A0A075B6T8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV9-1A0A075B6T8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV9-1A0A075B6T8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV9-1A0A075B6T8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV9-1A0A075B6T8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV9-1A0A075B6T8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV9-1A0A075B6T8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV9-1A0A075B6T8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAV9-1A0A075B6T8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC20.52■□□□□ 0.88
TRAV9-1A0A075B6T8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV9-1A0A075B6T8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV9-1A0A075B6T8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV9-1A0A075B6T8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV9-1A0A075B6T8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAV9-1A0A075B6T8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV9-1A0A075B6T8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV9-1A0A075B6T8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV9-1A0A075B6T8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV9-1A0A075B6T8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV9-1A0A075B6T8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAV9-1A0A075B6T8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.48■□□□□ 0.87
TRAV9-1A0A075B6T8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV9-1A0A075B6T8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV9-1A0A075B6T8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV9-1A0A075B6T8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV9-1A0A075B6T8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRAV9-1A0A075B6T8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV9-1A0A075B6T8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV9-1A0A075B6T8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV9-1A0A075B6T8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV9-1A0A075B6T8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV9-1A0A075B6T8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV9-1A0A075B6T8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV9-1A0A075B6T8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV9-1A0A075B6T8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV9-1A0A075B6T8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV9-1A0A075B6T8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV9-1A0A075B6T8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV9-1A0A075B6T8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TRAV9-1A0A075B6T8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV9-1A0A075B6T8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV9-1A0A075B6T8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV9-1A0A075B6T8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAV9-1A0A075B6T8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAV9-1A0A075B6T8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV9-1A0A075B6T8 AC135731.1-201ENST00000569415 2548 ntBASIC20.39■□□□□ 0.85
TRAV9-1A0A075B6T8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV9-1A0A075B6T8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV9-1A0A075B6T8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV9-1A0A075B6T8 ST7-AS1-201ENST00000456775 1889 ntBASIC20.38■□□□□ 0.85
TRAV9-1A0A075B6T8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV9-1A0A075B6T8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAV9-1A0A075B6T8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV9-1A0A075B6T8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV9-1A0A075B6T8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV9-1A0A075B6T8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV9-1A0A075B6T8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV9-1A0A075B6T8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRAV9-1A0A075B6T8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV9-1A0A075B6T8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV9-1A0A075B6T8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.33■□□□□ 0.84
TRAV9-1A0A075B6T8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAV9-1A0A075B6T8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAV9-1A0A075B6T8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV9-1A0A075B6T8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TRAV9-1A0A075B6T8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRAV9-1A0A075B6T8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV9-1A0A075B6T8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV9-1A0A075B6T8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAV9-1A0A075B6T8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TRAV9-1A0A075B6T8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TRAV9-1A0A075B6T8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV9-1A0A075B6T8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV9-1A0A075B6T8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRAV9-1A0A075B6T8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRAV9-1A0A075B6T8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV9-1A0A075B6T8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV9-1A0A075B6T8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV9-1A0A075B6T8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRAV9-1A0A075B6T8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms