Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 GUSBP3-202ENST00000513408 1296 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 AC124301.2-201ENST00000529781 556 ntTSL 2 BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 AP000763.1-201ENST00000539481 325 ntBASIC12.16□□□□□ -0.46
NCDNQ9UBB6 AC046168.2-202ENST00000561123 926 ntTSL 3 BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 SMIM22-204ENST00000588606 394 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 Metazoa_SRP.79-201ENST00000610676 290 ntBASIC12.16□□□□□ -0.46
NCDNQ9UBB6 AC007493.1-201ENST00000637635 683 ntTSL 5 BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 NPAP1P3-201ENST00000432327 1586 ntBASIC12.16□□□□□ -0.46
NCDNQ9UBB6 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 DNAJB8-202ENST00000469083 3365 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 TMTC4-201ENST00000328767 2101 ntTSL 2 BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 AC008764.8-201ENST00000623966 2717 ntBASIC12.16□□□□□ -0.46
NCDNQ9UBB6 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NCDNQ9UBB6 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 LINC01934-205ENST00000435411 1771 ntTSL 5 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 LRTM1-202ENST00000493075 1318 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 PKP2-202ENST00000340811 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 IL1R2-201ENST00000332549 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 SLC25A14-213ENST00000543953 1403 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 NMRAL2P-201ENST00000306399 891 ntBASIC12.15□□□□□ -0.46
NCDNQ9UBB6 RPL10A-201ENST00000322203 716 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 KITLG-203ENST00000357116 565 ntTSL 4 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 FAM86FP-202ENST00000427893 829 ntTSL 5 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 IL12A-205ENST00000480787 863 ntTSL 3 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 LYPLA1P2-201ENST00000513113 691 ntBASIC12.15□□□□□ -0.46
NCDNQ9UBB6 LINC02450-201ENST00000550177 1003 ntTSL 2 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 ARL1-209ENST00000551671 879 ntTSL 2 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 RBM17P4-201ENST00000558517 1192 ntBASIC12.15□□□□□ -0.46
NCDNQ9UBB6 AP000897.2-202ENST00000579332 821 ntTSL 3 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 TEX28-201ENST00000610938 1233 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 CU638689.3-201ENST00000624266 1031 ntBASIC12.15□□□□□ -0.46
NCDNQ9UBB6 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 ZNF683-202ENST00000403843 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 SMTNL1-201ENST00000399154 1536 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 VAMP7-201ENST00000262640 2496 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NCDNQ9UBB6 LINC02228-202ENST00000641261 2489 ntBASIC12.15□□□□□ -0.46
NCDNQ9UBB6 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
NCDNQ9UBB6 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.47
NCDNQ9UBB6 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NCDNQ9UBB6 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NCDNQ9UBB6 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NCDNQ9UBB6 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
NCDNQ9UBB6 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
NCDNQ9UBB6 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
NCDNQ9UBB6 BX537318.2-201ENST00000624893 4162 ntBASIC12.15□□□□□ -0.47
NCDNQ9UBB6 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.15□□□□□ -0.47
NCDNQ9UBB6 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NCDNQ9UBB6 LDB3-203ENST00000372056 1868 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 WDR6-221ENST00000610967 4259 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
NCDNQ9UBB6 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms