Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CHCHD5-201ENST00000324913 691 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 MRPL24-201ENST00000361531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 GGNBP1-201ENST00000374458 960 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 PTRH2-201ENST00000393038 901 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 AC113174.1-201ENST00000433897 105 ntBASIC12.85□□□□□ -0.35
MTHFRP42898 HYI-AS1-201ENST00000444386 545 ntTSL 2 BASIC12.85□□□□□ -0.35
MTHFRP42898 TCP10-205ENST00000476779 646 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
MTHFRP42898 B3GALT5-AS1-204ENST00000489821 1159 ntTSL 2 BASIC12.85□□□□□ -0.35
MTHFRP42898 AC079310.1-201ENST00000552524 700 ntTSL 3 BASIC12.85□□□□□ -0.35
MTHFRP42898 AC008870.3-201ENST00000566143 641 ntBASIC12.85□□□□□ -0.35
MTHFRP42898 AP002478.2-201ENST00000584060 557 ntTSL 4 BASIC12.85□□□□□ -0.35
MTHFRP42898 PTOV1-AS2-201ENST00000593654 596 ntTSL 2 BASIC12.85□□□□□ -0.35
MTHFRP42898 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC12.85□□□□□ -0.35
MTHFRP42898 CYP17A1-205ENST00000638272 1227 ntTSL 5 BASIC12.85□□□□□ -0.35
MTHFRP42898 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC12.85□□□□□ -0.35
MTHFRP42898 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 LRRC6-201ENST00000250173 1672 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC12.85□□□□□ -0.35
MTHFRP42898 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC12.85□□□□□ -0.35
MTHFRP42898 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC12.85□□□□□ -0.35
MTHFRP42898 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 ANXA3-209ENST00000512884 1335 ntTSL 5 BASIC12.85□□□□□ -0.35
MTHFRP42898 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.85□□□□□ -0.35
MTHFRP42898 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 ZNF155-207ENST00000590615 1888 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 NUP93-220ENST00000569842 2834 ntTSL 5 BASIC12.84□□□□□ -0.35
MTHFRP42898 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.84□□□□□ -0.35
MTHFRP42898 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.84□□□□□ -0.35
MTHFRP42898 ZBED9-201ENST00000452236 4877 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC12.84□□□□□ -0.35
MTHFRP42898 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
MTHFRP42898 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
MTHFRP42898 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
MTHFRP42898 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
MTHFRP42898 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 SPATA22-201ENST00000268981 1280 ntTSL 2 BASIC12.84□□□□□ -0.35
MTHFRP42898 KRTAP19-2-201ENST00000334055 380 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
MTHFRP42898 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC12.84□□□□□ -0.35
MTHFRP42898 TROAP-202ENST00000380327 675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 FAM238A-201ENST00000412114 1091 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 TXNDC9-205ENST00000434323 733 ntTSL 5 BASIC12.84□□□□□ -0.35
MTHFRP42898 AC023347.1-201ENST00000435352 604 ntTSL 4 BASIC12.84□□□□□ -0.35
MTHFRP42898 KRTAP4-16-201ENST00000440582 708 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
MTHFRP42898 AC073472.1-201ENST00000441433 803 ntBASIC12.84□□□□□ -0.35
MTHFRP42898 AL513366.1-201ENST00000456427 1248 ntBASIC12.84□□□□□ -0.35
MTHFRP42898 RN7SL26P-201ENST00000460792 307 ntBASIC12.84□□□□□ -0.35
MTHFRP42898 RN7SL559P-201ENST00000476501 297 ntBASIC12.84□□□□□ -0.35
MTHFRP42898 EHMT1-210ENST00000478940 591 ntTSL 4 BASIC12.84□□□□□ -0.35
MTHFRP42898 LINC02105-201ENST00000504552 1003 ntTSL 3 BASIC12.84□□□□□ -0.35
MTHFRP42898 RN7SL811P-201ENST00000580735 298 ntBASIC12.84□□□□□ -0.35
MTHFRP42898 IGHV1OR15-1-201ENST00000604066 353 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
MTHFRP42898 AC092120.3-201ENST00000605168 568 ntBASIC12.84□□□□□ -0.35
MTHFRP42898 AL121658.1-201ENST00000608489 712 ntBASIC12.84□□□□□ -0.35
MTHFRP42898 AC090826.3-201ENST00000611178 834 ntBASIC12.84□□□□□ -0.35
MTHFRP42898 BACH1-AS1-202ENST00000615718 700 ntTSL 5 BASIC12.84□□□□□ -0.35
MTHFRP42898 Metazoa_SRP.76-201ENST00000619429 290 ntBASIC12.84□□□□□ -0.35
MTHFRP42898 AC135068.8-201ENST00000630556 353 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
MTHFRP42898 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 CFAP157-202ENST00000373295 1721 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
MTHFRP42898 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
MTHFRP42898 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC12.84□□□□□ -0.35
MTHFRP42898 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
MTHFRP42898 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
MTHFRP42898 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC12.84□□□□□ -0.35
MTHFRP42898 CRISP2-203ENST00000618917 1492 ntTSL 5 BASIC12.84□□□□□ -0.35
MTHFRP42898 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.84□□□□□ -0.35
MTHFRP42898 MVK-202ENST00000392727 1770 ntTSL 2 BASIC12.84□□□□□ -0.35
MTHFRP42898 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC12.84□□□□□ -0.35
MTHFRP42898 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
MTHFRP42898 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MTHFRP42898 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.84□□□□□ -0.35
MTHFRP42898 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
MTHFRP42898 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms