Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 ISL1-203ENST00000511384 981 ntTSL 5 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 AP003063.1-202ENST00000529238 520 ntTSL 3 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 AC016292.2-201ENST00000618967 210 ntBASIC13.03□□□□□ -0.32
LMO3Q8TAP4 PRSS2-204ENST00000632805 807 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 HIST1H2APS4-202ENST00000635537 681 ntBASIC13.03□□□□□ -0.32
LMO3Q8TAP4 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 CALU-201ENST00000249364 3357 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 MEF2C-213ENST00000508569 1882 ntTSL 5 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 AC239801.1-201ENST00000458399 1398 ntBASIC13.03□□□□□ -0.32
LMO3Q8TAP4 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 FAN1-203ENST00000561607 2690 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 AC016355.1-201ENST00000604760 1533 ntBASIC13.03□□□□□ -0.32
LMO3Q8TAP4 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 BEND3P1-202ENST00000449695 2762 ntTSL 4 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 TCN2-205ENST00000450638 2159 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 AL391294.1-201ENST00000641352 4068 ntBASIC13.03□□□□□ -0.32
LMO3Q8TAP4 PAX4-208ENST00000639438 2206 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LMO3Q8TAP4 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LMO3Q8TAP4 KCNA2-207ENST00000638532 2426 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
LMO3Q8TAP4 ATP8B5P-204ENST00000439972 2522 ntTSL 2 BASIC13.02□□□□□ -0.32
LMO3Q8TAP4 JUP-202ENST00000393930 3298 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
LMO3Q8TAP4 AL583810.2-201ENST00000556430 3254 ntBASIC13.02□□□□□ -0.32
LMO3Q8TAP4 CLIP3-201ENST00000360535 3370 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LMO3Q8TAP4 AC110615.1-201ENST00000438151 1955 ntBASIC13.02□□□□□ -0.32
LMO3Q8TAP4 STRADA-205ENST00000447001 2014 ntTSL 2 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 CHRM1-201ENST00000306960 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 PJA1-204ENST00000374584 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 ELOVL7-201ENST00000425382 3827 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 MRPS11P1-201ENST00000437558 522 ntBASIC13.02□□□□□ -0.33
LMO3Q8TAP4 C2orf27AP2-201ENST00000438438 555 ntBASIC13.02□□□□□ -0.33
LMO3Q8TAP4 LINC01210-204ENST00000478772 1288 ntTSL 5 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 AC253536.5-201ENST00000506097 347 ntBASIC13.02□□□□□ -0.33
LMO3Q8TAP4 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 UTP23-203ENST00000517820 796 ntTSL 3 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 AC133539.1-201ENST00000562644 420 ntTSL 5 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 MED11-203ENST00000575284 652 ntTSL 3 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 RN7SL811P-201ENST00000580735 298 ntBASIC13.02□□□□□ -0.33
LMO3Q8TAP4 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 IFI27-212ENST00000618863 505 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 AC027682.7-201ENST00000623147 2121 ntBASIC13.02□□□□□ -0.33
LMO3Q8TAP4 RIN1-208ENST00000627248 243 ntTSL 5 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 AL590556.2-202ENST00000636906 844 ntBASIC13.02□□□□□ -0.33
LMO3Q8TAP4 ELOA2-201ENST00000332567 3050 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 CDK13-206ENST00000611390 2222 ntTSL 5 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 EXD2-204ENST00000409242 2496 ntTSL 2 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 EXOSC9-202ENST00000379663 1529 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 IMPDH1P11-201ENST00000567885 1504 ntBASIC13.02□□□□□ -0.33
LMO3Q8TAP4 FETUB-201ENST00000265029 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 TAF1C-218ENST00000567759 3879 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 ZNF683-202ENST00000403843 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 PIH1D2-207ENST00000530641 1838 ntTSL 2 BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LMO3Q8TAP4 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LMO3Q8TAP4 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.01□□□□□ -0.33
LMO3Q8TAP4 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LMO3Q8TAP4 AC055813.1-201ENST00000587110 2123 ntBASIC13.01□□□□□ -0.33
LMO3Q8TAP4 SEC61A1-201ENST00000243253 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO3Q8TAP4 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
LMO3Q8TAP4 CLK4-215ENST00000611733 2182 ntTSL 5 BASIC13.01□□□□□ -0.33
LMO3Q8TAP4 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC13.01□□□□□ -0.33
LMO3Q8TAP4 PTGR2-201ENST00000267568 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO3Q8TAP4 CSRNP1-202ENST00000514182 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO3Q8TAP4 TP53-204ENST00000420246 2653 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LMO3Q8TAP4 TP53-227ENST00000622645 2653 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms