Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NCDNQ9UBB6 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.23□□□□□ -0.45
NCDNQ9UBB6 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.23□□□□□ -0.45
NCDNQ9UBB6 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 PRAMEF7-201ENST00000330881 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 CLIC1-207ENST00000375780 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 RABL2A-207ENST00000409875 2282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 AOC4P-203ENST00000566825 2289 ntBASIC12.22□□□□□ -0.45
NCDNQ9UBB6 CUL7-201ENST00000265348 5254 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 ASB11-203ENST00000480796 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 HPRT1-201ENST00000298556 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 OR4C5-201ENST00000319813 981 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 SPATA32-201ENST00000331780 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 SUPT3H-201ENST00000371458 728 ntTSL 5 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 GYG2P1-203ENST00000382965 149 ntBASIC12.22□□□□□ -0.45
NCDNQ9UBB6 IGLV2-11-201ENST00000390314 400 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 PGAM1P4-201ENST00000397343 750 ntBASIC12.22□□□□□ -0.45
NCDNQ9UBB6 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 LINC02054-201ENST00000419960 885 ntTSL 3 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 AP001630.1-201ENST00000428410 437 ntTSL 2 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 SLC25A5P3-201ENST00000444439 885 ntBASIC12.22□□□□□ -0.45
NCDNQ9UBB6 AL139807.1-201ENST00000500636 704 ntTSL 3 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 AC091849.2-201ENST00000503113 692 ntTSL 3 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 ZNHIT1P1-201ENST00000523947 444 ntBASIC12.22□□□□□ -0.45
NCDNQ9UBB6 AP001189.3-201ENST00000531511 651 ntTSL 3 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 AC092471.1-201ENST00000536497 572 ntTSL 5 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 LINC02253-202ENST00000560314 565 ntTSL 5 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 AC068987.2-201ENST00000565518 896 ntBASIC12.22□□□□□ -0.45
NCDNQ9UBB6 AC023824.6-201ENST00000565523 703 ntTSL 2 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 CA5AP1-201ENST00000568175 576 ntBASIC12.22□□□□□ -0.45
NCDNQ9UBB6 AC005154.1-217ENST00000584199 581 ntTSL 4 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 AD000671.1-201ENST00000591613 1037 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 AL589826.2-201ENST00000635423 993 ntTSL 5 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 ELMO2-201ENST00000290246 3669 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 OVCH2-203ENST00000612000 1730 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 AC131902.2-201ENST00000566892 2172 ntBASIC12.22□□□□□ -0.45
NCDNQ9UBB6 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 IL19-204ENST00000620365 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.22□□□□□ -0.45
NCDNQ9UBB6 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 SPP1-203ENST00000395080 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 CCT6P3-203ENST00000452026 1383 ntBASIC12.21□□□□□ -0.45
NCDNQ9UBB6 AL132639.2-201ENST00000605298 1359 ntBASIC12.21□□□□□ -0.45
NCDNQ9UBB6 ENO4-203ENST00000409522 1840 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 COA3-201ENST00000328434 771 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 AC005037.1-202ENST00000332935 820 ntTSL 3 BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 RPL17P34-201ENST00000394133 555 ntBASIC12.21□□□□□ -0.45
NCDNQ9UBB6 AC092431.1-201ENST00000415342 420 ntTSL 3 BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 LINC01219-201ENST00000418612 722 ntTSL 2 BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 BANF1P4-201ENST00000420029 270 ntBASIC12.21□□□□□ -0.45
NCDNQ9UBB6 KIF9-204ENST00000425853 740 ntTSL 2 BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 AP000346.2-201ENST00000430707 906 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 AL356481.1-201ENST00000434999 578 ntTSL 5 BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 AC117402.1-201ENST00000485473 856 ntTSL 3 BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 MYCT1-202ENST00000529453 724 ntTSL 3 BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 AC009065.7-201ENST00000561544 580 ntTSL 3 BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 AC093802.2-201ENST00000567853 583 ntBASIC12.21□□□□□ -0.45
NCDNQ9UBB6 AC005726.6-201ENST00000579019 1083 ntTSL 3 BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 ZNF226-212ENST00000588795 641 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 ZNF761-204ENST00000610928 938 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NCDNQ9UBB6 AC013564.1-201ENST00000612806 707 ntBASIC12.21□□□□□ -0.45
NCDNQ9UBB6 AL627230.4-201ENST00000617851 370 ntBASIC12.21□□□□□ -0.45
NCDNQ9UBB6 AC080080.2-201ENST00000624307 590 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms