Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.92□□□□□ -0.34
SLC1A1P43005 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SLC1A1P43005 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC12.92□□□□□ -0.34
SLC1A1P43005 SLC5A11-208ENST00000565769 2214 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 SLC5A11-209ENST00000567758 2246 ntTSL 5 BASIC12.92□□□□□ -0.34
SLC1A1P43005 ELF5-206ENST00000620316 2217 ntTSL 5 BASIC12.92□□□□□ -0.34
SLC1A1P43005 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
SLC1A1P43005 SALL2-207ENST00000614342 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SLC1A1P43005 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 ZKSCAN3-201ENST00000252211 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 BLOC1S5-TXNDC5-201ENST00000439343 3030 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SLC1A1P43005 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.91□□□□□ -0.34
SLC1A1P43005 DDX27-206ENST00000618172 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 C3orf35-201ENST00000328376 1859 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 DOCK10-201ENST00000258390 7260 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
SLC1A1P43005 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 CRX-202ENST00000539067 2275 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SLC1A1P43005 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 ITGB1-202ENST00000396033 3784 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
SLC1A1P43005 MIS12-206ENST00000611091 2691 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SLC1A1P43005 KRT31-201ENST00000251645 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 FCHO1-208ENST00000595033 2907 ntTSL 2 BASIC12.91□□□□□ -0.34
SLC1A1P43005 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
SLC1A1P43005 ATAT1-201ENST00000318999 2611 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 NAB1-201ENST00000337386 4358 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC12.91□□□□□ -0.34
SLC1A1P43005 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SLC1A1P43005 MIR874-201ENST00000401190 78 ntBASIC12.91□□□□□ -0.34
SLC1A1P43005 AL356277.1-201ENST00000401875 267 ntBASIC12.91□□□□□ -0.34
SLC1A1P43005 PGAM1P10-201ENST00000402426 761 ntBASIC12.91□□□□□ -0.34
SLC1A1P43005 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
SLC1A1P43005 ALDH7A1-203ENST00000413020 1126 ntTSL 2 BASIC12.91□□□□□ -0.34
SLC1A1P43005 AC006022.1-201ENST00000425261 388 ntBASIC12.91□□□□□ -0.34
SLC1A1P43005 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC12.91□□□□□ -0.34
SLC1A1P43005 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC12.91□□□□□ -0.34
SLC1A1P43005 RRM2P2-201ENST00000436212 652 ntBASIC12.91□□□□□ -0.34
SLC1A1P43005 FTLP16-201ENST00000446400 513 ntBASIC12.91□□□□□ -0.34
SLC1A1P43005 AC104115.1-201ENST00000484005 623 ntBASIC12.91□□□□□ -0.34
SLC1A1P43005 AC083801.1-201ENST00000491689 358 ntBASIC12.91□□□□□ -0.34
SLC1A1P43005 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC12.91□□□□□ -0.34
SLC1A1P43005 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC12.91□□□□□ -0.34
SLC1A1P43005 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC12.91□□□□□ -0.34
SLC1A1P43005 AC006548.2-201ENST00000605217 529 ntBASIC12.91□□□□□ -0.34
SLC1A1P43005 LINC01667-201ENST00000623554 1137 ntTSL 5 BASIC12.91□□□□□ -0.34
SLC1A1P43005 WSB1-207ENST00000579733 1670 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 ZIK1-207ENST00000599456 2860 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
SLC1A1P43005 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC12.91□□□□□ -0.34
SLC1A1P43005 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SLC1A1P43005 AC130456.2-201ENST00000563613 1937 ntTSL 5 BASIC12.91□□□□□ -0.34
SLC1A1P43005 SERTAD3-202ENST00000392028 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 TIRAP-202ENST00000392679 2195 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SLC1A1P43005 SORBS2-203ENST00000319471 2824 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC12.91□□□□□ -0.34
SLC1A1P43005 LINC01511-202ENST00000504989 1616 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SLC1A1P43005 CNGA3-203ENST00000393504 3841 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
SLC1A1P43005 RBAK-201ENST00000353796 4125 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 DDX4-212ENST00000514278 2451 ntTSL 5 BASIC12.9□□□□□ -0.34
SLC1A1P43005 SLC22A12-204ENST00000377574 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 AC006262.1-201ENST00000593980 1316 ntTSL 5 BASIC12.9□□□□□ -0.34
SLC1A1P43005 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 ZNF792-202ENST00000605484 2567 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 AL358933.1-201ENST00000565046 2830 ntBASIC12.9□□□□□ -0.34
SLC1A1P43005 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 ISG20L2-201ENST00000313146 3303 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 MARK3-201ENST00000216288 2911 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 PTCD2-211ENST00000536805 1911 ntTSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 TGM5-201ENST00000220420 2767 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 TGM5-205ENST00000610827 2756 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SLC1A1P43005 PROSER2-AS1-201ENST00000445498 3146 ntTSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 PRAMEF12-201ENST00000357726 1786 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 PEX5L-213ENST00000476138 2361 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 MRPL11-202ENST00000329819 922 ntTSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 GNRH2-203ENST00000380346 353 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SLC1A1P43005 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC12.9□□□□□ -0.34
SLC1A1P43005 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SLC1A1P43005 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms