Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
MTHFRP42898 AC022748.2-203ENST00000564933 1432 ntBASIC12.94□□□□□ -0.34
MTHFRP42898 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.94□□□□□ -0.34
MTHFRP42898 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC12.94□□□□□ -0.34
MTHFRP42898 AP001972.5-201ENST00000624624 2338 ntBASIC12.94□□□□□ -0.34
MTHFRP42898 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC12.94□□□□□ -0.34
MTHFRP42898 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 AC008806.1-201ENST00000624962 2443 ntBASIC12.93□□□□□ -0.34
MTHFRP42898 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 AL009178.1-201ENST00000392115 1486 ntBASIC12.93□□□□□ -0.34
MTHFRP42898 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 SUCLG2P2-201ENST00000307241 1296 ntBASIC12.93□□□□□ -0.34
MTHFRP42898 TRAF3IP2-206ENST00000368735 903 ntTSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 AC007389.1-202ENST00000377977 1266 ntTSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 LINC01044-201ENST00000413637 657 ntTSL 3 BASIC12.93□□□□□ -0.34
MTHFRP42898 AL031663.2-201ENST00000417630 355 ntTSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 MAPT-207ENST00000420682 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 PRSS3-204ENST00000429677 786 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 TRERNA1-201ENST00000431460 462 ntTSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 ACP1-207ENST00000439645 605 ntTSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 AC023115.1-201ENST00000450944 574 ntTSL 4 BASIC12.93□□□□□ -0.34
MTHFRP42898 AC016735.1-201ENST00000457457 237 ntTSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 IGKV2D-24-201ENST00000462693 390 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
MTHFRP42898 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC12.93□□□□□ -0.34
MTHFRP42898 IGKV2-24-201ENST00000484817 390 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
MTHFRP42898 AC005355.1-201ENST00000513329 714 ntTSL 3 BASIC12.93□□□□□ -0.34
MTHFRP42898 FAM86B1-215ENST00000533513 725 ntTSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 LMO3-228ENST00000541846 573 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
MTHFRP42898 BORCS5-203ENST00000542728 580 ntTSL 3 BASIC12.93□□□□□ -0.34
MTHFRP42898 GLTP-205ENST00000544393 914 ntTSL 3 BASIC12.93□□□□□ -0.34
MTHFRP42898 TRAPPC2L-202ENST00000561840 558 ntTSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 HKR1-222ENST00000591417 525 ntTSL 4 BASIC12.93□□□□□ -0.34
MTHFRP42898 AD000671.1-201ENST00000591613 1037 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 AL157392.3-201ENST00000601075 833 ntTSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 LDAH-213ENST00000626491 1179 ntTSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 AL160408.6-201ENST00000632063 1257 ntTSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 AC092329.4-208ENST00000640354 562 ntTSL 4 BASIC12.93□□□□□ -0.34
MTHFRP42898 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 KRT31-201ENST00000251645 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 IL1RAP-210ENST00000434491 1565 ntTSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
MTHFRP42898 SULT1A4-201ENST00000360423 1390 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 AC011487.2-202ENST00000599707 1356 ntBASIC12.93□□□□□ -0.34
MTHFRP42898 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MTHFRP42898 LINC02228-202ENST00000641261 2489 ntBASIC12.93□□□□□ -0.34
MTHFRP42898 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.93□□□□□ -0.34
MTHFRP42898 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC12.92□□□□□ -0.34
MTHFRP42898 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 TRIT1-201ENST00000316891 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC12.92□□□□□ -0.34
MTHFRP42898 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
MTHFRP42898 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 FAM49B-220ENST00000522250 1647 ntTSL 5 BASIC12.92□□□□□ -0.34
MTHFRP42898 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.92□□□□□ -0.34
MTHFRP42898 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
MTHFRP42898 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.92□□□□□ -0.34
MTHFRP42898 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC12.92□□□□□ -0.34
MTHFRP42898 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms