Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
ARFGEF1Q9Y6D6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ARFGEF1Q9Y6D6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.88■■□□□ 1.89
ARFGEF1Q9Y6D6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.88■■□□□ 1.89
ARFGEF1Q9Y6D6 AC142381.4-202ENST00000563973 229 ntBASIC26.88■■□□□ 1.89
ARFGEF1Q9Y6D6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
ARFGEF1Q9Y6D6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ARFGEF1Q9Y6D6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.87■■□□□ 1.89
ARFGEF1Q9Y6D6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ARFGEF1Q9Y6D6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
ARFGEF1Q9Y6D6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ARFGEF1Q9Y6D6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ARFGEF1Q9Y6D6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ARFGEF1Q9Y6D6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC26.87■■□□□ 1.89
ARFGEF1Q9Y6D6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
ARFGEF1Q9Y6D6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC26.87■■□□□ 1.89
ARFGEF1Q9Y6D6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC26.87■■□□□ 1.89
ARFGEF1Q9Y6D6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ARFGEF1Q9Y6D6 AC009237.3-201ENST00000393279 1427 ntBASIC26.87■■□□□ 1.89
ARFGEF1Q9Y6D6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.87■■□□□ 1.89
ARFGEF1Q9Y6D6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ARFGEF1Q9Y6D6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ARFGEF1Q9Y6D6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ARFGEF1Q9Y6D6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC26.86■■□□□ 1.89
ARFGEF1Q9Y6D6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.86■■□□□ 1.89
ARFGEF1Q9Y6D6 AC010141.2-201ENST00000452426 721 ntBASIC26.86■■□□□ 1.89
ARFGEF1Q9Y6D6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.86■■□□□ 1.89
ARFGEF1Q9Y6D6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.86■■□□□ 1.89
ARFGEF1Q9Y6D6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.86■■□□□ 1.89
ARFGEF1Q9Y6D6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ARFGEF1Q9Y6D6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
ARFGEF1Q9Y6D6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
ARFGEF1Q9Y6D6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.85■■□□□ 1.89
ARFGEF1Q9Y6D6 MYC-209ENST00000641252 345 ntBASIC26.85■■□□□ 1.89
ARFGEF1Q9Y6D6 AC068338.2-201ENST00000563278 1430 ntBASIC26.85■■□□□ 1.89
ARFGEF1Q9Y6D6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
ARFGEF1Q9Y6D6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ARFGEF1Q9Y6D6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
ARFGEF1Q9Y6D6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
ARFGEF1Q9Y6D6 AC007322.4-201ENST00000509611 723 ntBASIC26.84■■□□□ 1.89
ARFGEF1Q9Y6D6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
ARFGEF1Q9Y6D6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.83■■□□□ 1.89
ARFGEF1Q9Y6D6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.83■■□□□ 1.89
ARFGEF1Q9Y6D6 AC092118.2-201ENST00000613495 667 ntBASIC26.83■■□□□ 1.89
ARFGEF1Q9Y6D6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ARFGEF1Q9Y6D6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ARFGEF1Q9Y6D6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
ARFGEF1Q9Y6D6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.89
ARFGEF1Q9Y6D6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
ARFGEF1Q9Y6D6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.83■■□□□ 1.89
ARFGEF1Q9Y6D6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ARFGEF1Q9Y6D6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC26.83■■□□□ 1.89
ARFGEF1Q9Y6D6 AP001160.3-201ENST00000601484 763 ntBASIC26.83■■□□□ 1.89
ARFGEF1Q9Y6D6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.83■■□□□ 1.89
ARFGEF1Q9Y6D6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.83■■□□□ 1.89
ARFGEF1Q9Y6D6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
ARFGEF1Q9Y6D6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
ARFGEF1Q9Y6D6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ARFGEF1Q9Y6D6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.82■■□□□ 1.88
ARFGEF1Q9Y6D6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC26.82■■□□□ 1.88
ARFGEF1Q9Y6D6 MIPEPP3-201ENST00000412105 444 ntBASIC26.82■■□□□ 1.88
ARFGEF1Q9Y6D6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.82■■□□□ 1.88
ARFGEF1Q9Y6D6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
ARFGEF1Q9Y6D6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ARFGEF1Q9Y6D6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.82■■□□□ 1.88
ARFGEF1Q9Y6D6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.82■■□□□ 1.88
ARFGEF1Q9Y6D6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
ARFGEF1Q9Y6D6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ARFGEF1Q9Y6D6 AC079630.1-202ENST00000618127 1840 ntBASIC26.82■■□□□ 1.88
ARFGEF1Q9Y6D6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
ARFGEF1Q9Y6D6 AC138907.5-202ENST00000569484 235 ntBASIC26.81■■□□□ 1.88
ARFGEF1Q9Y6D6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.81■■□□□ 1.88
ARFGEF1Q9Y6D6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ARFGEF1Q9Y6D6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.81■■□□□ 1.88
ARFGEF1Q9Y6D6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ARFGEF1Q9Y6D6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ARFGEF1Q9Y6D6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ARFGEF1Q9Y6D6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ARFGEF1Q9Y6D6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
ARFGEF1Q9Y6D6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ARFGEF1Q9Y6D6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.8■■□□□ 1.88
ARFGEF1Q9Y6D6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.8■■□□□ 1.88
ARFGEF1Q9Y6D6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
ARFGEF1Q9Y6D6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.8■■□□□ 1.88
ARFGEF1Q9Y6D6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ARFGEF1Q9Y6D6 AL158047.1-201ENST00000445918 881 ntBASIC26.79■■□□□ 1.88
ARFGEF1Q9Y6D6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
ARFGEF1Q9Y6D6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26.79■■□□□ 1.88
ARFGEF1Q9Y6D6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.79■■□□□ 1.88
ARFGEF1Q9Y6D6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
ARFGEF1Q9Y6D6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
ARFGEF1Q9Y6D6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.79■■□□□ 1.88
ARFGEF1Q9Y6D6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.79■■□□□ 1.88
ARFGEF1Q9Y6D6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.79■■□□□ 1.88
ARFGEF1Q9Y6D6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.79■■□□□ 1.88
ARFGEF1Q9Y6D6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ARFGEF1Q9Y6D6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.79■■□□□ 1.88
ARFGEF1Q9Y6D6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ARFGEF1Q9Y6D6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
ARFGEF1Q9Y6D6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.78■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms