Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA2Q9Y5H9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA2Q9Y5H9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA2Q9Y5H9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA2Q9Y5H9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.37■■□□□ 1.49
PCDHA2Q9Y5H9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDHA2Q9Y5H9 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.37■■□□□ 1.49
PCDHA2Q9Y5H9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.37■■□□□ 1.49
PCDHA2Q9Y5H9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA2Q9Y5H9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
PCDHA2Q9Y5H9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA2Q9Y5H9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA2Q9Y5H9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA2Q9Y5H9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA2Q9Y5H9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA2Q9Y5H9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA2Q9Y5H9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA2Q9Y5H9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA2Q9Y5H9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA2Q9Y5H9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.36■■□□□ 1.49
PCDHA2Q9Y5H9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
PCDHA2Q9Y5H9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA2Q9Y5H9 AC127496.7-201ENST00000625110 1798 ntBASIC24.36■■□□□ 1.49
PCDHA2Q9Y5H9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDHA2Q9Y5H9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA2Q9Y5H9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA2Q9Y5H9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA2Q9Y5H9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.35■■□□□ 1.49
PCDHA2Q9Y5H9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
PCDHA2Q9Y5H9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.35■■□□□ 1.49
PCDHA2Q9Y5H9 KRT18P14-201ENST00000534205 1250 ntBASIC24.35■■□□□ 1.49
PCDHA2Q9Y5H9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.35■■□□□ 1.49
PCDHA2Q9Y5H9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDHA2Q9Y5H9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA2Q9Y5H9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDHA2Q9Y5H9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA2Q9Y5H9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 AL117328.2-201ENST00000624617 1940 ntBASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA2Q9Y5H9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHA2Q9Y5H9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
PCDHA2Q9Y5H9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
PCDHA2Q9Y5H9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHA2Q9Y5H9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
PCDHA2Q9Y5H9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
PCDHA2Q9Y5H9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.33■■□□□ 1.49
PCDHA2Q9Y5H9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
PCDHA2Q9Y5H9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHA2Q9Y5H9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDHA2Q9Y5H9 GUSBP5-202ENST00000510805 1989 ntBASIC24.33■■□□□ 1.48
PCDHA2Q9Y5H9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA2Q9Y5H9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
PCDHA2Q9Y5H9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA2Q9Y5H9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA2Q9Y5H9 IKBKGP1-201ENST00000612193 1073 ntBASIC24.32■■□□□ 1.48
PCDHA2Q9Y5H9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA2Q9Y5H9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA2Q9Y5H9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA2Q9Y5H9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA2Q9Y5H9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA2Q9Y5H9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHA2Q9Y5H9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA2Q9Y5H9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA2Q9Y5H9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA2Q9Y5H9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA2Q9Y5H9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDHA2Q9Y5H9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA2Q9Y5H9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA2Q9Y5H9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PCDHA2Q9Y5H9 LINC01960-201ENST00000563759 1884 ntBASIC24.31■■□□□ 1.48
PCDHA2Q9Y5H9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
PCDHA2Q9Y5H9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDHA2Q9Y5H9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHA2Q9Y5H9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA2Q9Y5H9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA2Q9Y5H9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA2Q9Y5H9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA2Q9Y5H9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA2Q9Y5H9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA2Q9Y5H9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.3■■□□□ 1.48
PCDHA2Q9Y5H9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDHA2Q9Y5H9 NTF6G-201ENST00000591094 616 ntBASIC24.3■■□□□ 1.48
PCDHA2Q9Y5H9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA2Q9Y5H9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA2Q9Y5H9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA2Q9Y5H9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA2Q9Y5H9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms