Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGB1Q9Y5G3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGB1Q9Y5G3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHGB1Q9Y5G3 BHLHE23-202ENST00000612929 1109 ntBASIC19.79■□□□□ 0.76
PCDHGB1Q9Y5G3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHGB1Q9Y5G3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGB1Q9Y5G3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGB1Q9Y5G3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PCDHGB1Q9Y5G3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGB1Q9Y5G3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGB1Q9Y5G3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 FEM1AP4-201ENST00000443167 1987 ntBASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 Z98882.1-201ENST00000622160 2253 ntBASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGB1Q9Y5G3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
PCDHGB1Q9Y5G3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGB1Q9Y5G3 AC144652.1-201ENST00000609974 1624 ntBASIC19.77■□□□□ 0.76
PCDHGB1Q9Y5G3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHGB1Q9Y5G3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGB1Q9Y5G3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGB1Q9Y5G3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGB1Q9Y5G3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGB1Q9Y5G3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGB1Q9Y5G3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHGB1Q9Y5G3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
PCDHGB1Q9Y5G3 KRT8P33-201ENST00000508125 1423 ntBASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 MIR4281-201ENST00000580852 62 ntBASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 THA1P-201ENST00000590384 1145 ntBASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGB1Q9Y5G3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGB1Q9Y5G3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGB1Q9Y5G3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGB1Q9Y5G3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PCDHGB1Q9Y5G3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGB1Q9Y5G3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGB1Q9Y5G3 AC131212.1-201ENST00000613771 668 ntBASIC19.74■□□□□ 0.75
PCDHGB1Q9Y5G3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGB1Q9Y5G3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGB1Q9Y5G3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGB1Q9Y5G3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHGB1Q9Y5G3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms