Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB13Q9Y5F0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB13Q9Y5F0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB13Q9Y5F0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB13Q9Y5F0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB13Q9Y5F0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB13Q9Y5F0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB13Q9Y5F0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB13Q9Y5F0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB13Q9Y5F0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB13Q9Y5F0 IGHV3-19-201ENST00000521488 291 ntBASIC23.92■■□□□ 1.42
PCDHB13Q9Y5F0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.92■■□□□ 1.42
PCDHB13Q9Y5F0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB13Q9Y5F0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB13Q9Y5F0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PCDHB13Q9Y5F0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.92■■□□□ 1.42
PCDHB13Q9Y5F0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PCDHB13Q9Y5F0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB13Q9Y5F0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB13Q9Y5F0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDHB13Q9Y5F0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDHB13Q9Y5F0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB13Q9Y5F0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDHB13Q9Y5F0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.91■■□□□ 1.42
PCDHB13Q9Y5F0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
PCDHB13Q9Y5F0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB13Q9Y5F0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB13Q9Y5F0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB13Q9Y5F0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB13Q9Y5F0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB13Q9Y5F0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB13Q9Y5F0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB13Q9Y5F0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB13Q9Y5F0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
PCDHB13Q9Y5F0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDHB13Q9Y5F0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.9■■□□□ 1.42
PCDHB13Q9Y5F0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB13Q9Y5F0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB13Q9Y5F0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDHB13Q9Y5F0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB13Q9Y5F0 LINC00526-201ENST00000581067 1875 ntBASIC23.9■■□□□ 1.42
PCDHB13Q9Y5F0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
PCDHB13Q9Y5F0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.89■■□□□ 1.42
PCDHB13Q9Y5F0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.89■■□□□ 1.42
PCDHB13Q9Y5F0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.89■■□□□ 1.42
PCDHB13Q9Y5F0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
PCDHB13Q9Y5F0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHB13Q9Y5F0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHB13Q9Y5F0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHB13Q9Y5F0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHB13Q9Y5F0 AC079834.2-201ENST00000609776 1949 ntBASIC23.89■■□□□ 1.42
PCDHB13Q9Y5F0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHB13Q9Y5F0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.89■■□□□ 1.41
PCDHB13Q9Y5F0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.89■■□□□ 1.41
PCDHB13Q9Y5F0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHB13Q9Y5F0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB13Q9Y5F0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHB13Q9Y5F0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHB13Q9Y5F0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB13Q9Y5F0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB13Q9Y5F0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
PCDHB13Q9Y5F0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PCDHB13Q9Y5F0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHB13Q9Y5F0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHB13Q9Y5F0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHB13Q9Y5F0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
PCDHB13Q9Y5F0 TSPY26P-201ENST00000476365 1326 ntBASIC23.87■■□□□ 1.41
PCDHB13Q9Y5F0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB13Q9Y5F0 OR7E47P-201ENST00000546390 1422 ntBASIC23.87■■□□□ 1.41
PCDHB13Q9Y5F0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.87■■□□□ 1.41
PCDHB13Q9Y5F0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.87■■□□□ 1.41
PCDHB13Q9Y5F0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.87■■□□□ 1.41
PCDHB13Q9Y5F0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB13Q9Y5F0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB13Q9Y5F0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB13Q9Y5F0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHB13Q9Y5F0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB13Q9Y5F0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
PCDHB13Q9Y5F0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHB13Q9Y5F0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB13Q9Y5F0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHB13Q9Y5F0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB13Q9Y5F0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB13Q9Y5F0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB13Q9Y5F0 AC092053.2-201ENST00000640557 1818 ntBASIC23.86■■□□□ 1.41
PCDHB13Q9Y5F0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB13Q9Y5F0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHB13Q9Y5F0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB13Q9Y5F0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB13Q9Y5F0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDHB13Q9Y5F0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
PCDHB13Q9Y5F0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
PCDHB13Q9Y5F0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB13Q9Y5F0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB13Q9Y5F0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PCDHB13Q9Y5F0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.85■■□□□ 1.41
PCDHB13Q9Y5F0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDHB13Q9Y5F0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDHB13Q9Y5F0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
PCDHB13Q9Y5F0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms