Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 POU5F1P3-201ENST00000428824 1078 ntBASIC41.53■■■■■ 4.24
SHROOM4Q9ULL8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC41.53■■■■■ 4.24
SHROOM4Q9ULL8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC41.52■■■■■ 4.24
SHROOM4Q9ULL8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC41.52■■■■■ 4.24
SHROOM4Q9ULL8 AC098934.4-201ENST00000564127 592 ntBASIC41.52■■■■■ 4.24
SHROOM4Q9ULL8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC41.52■■■■■ 4.24
SHROOM4Q9ULL8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC41.51■■■■■ 4.24
SHROOM4Q9ULL8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC41.51■■■■■ 4.24
SHROOM4Q9ULL8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC41.51■■■■■ 4.24
SHROOM4Q9ULL8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC41.51■■■■■ 4.24
SHROOM4Q9ULL8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC41.51■■■■■ 4.24
SHROOM4Q9ULL8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC41.51■■■■■ 4.24
SHROOM4Q9ULL8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC41.51■■■■■ 4.24
SHROOM4Q9ULL8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC41.51■■■■■ 4.24
SHROOM4Q9ULL8 AC005181.1-201ENST00000604782 1256 ntBASIC41.51■■■■■ 4.24
SHROOM4Q9ULL8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC41.51■■■■■ 4.24
SHROOM4Q9ULL8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC41.51■■■■■ 4.24
SHROOM4Q9ULL8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC41.5■■■■■ 4.23
SHROOM4Q9ULL8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC41.5■■■■■ 4.23
SHROOM4Q9ULL8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC41.5■■■■■ 4.23
SHROOM4Q9ULL8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC41.49■■■■■ 4.23
SHROOM4Q9ULL8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC41.49■■■■■ 4.23
SHROOM4Q9ULL8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC41.49■■■■■ 4.23
SHROOM4Q9ULL8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC41.49■■■■■ 4.23
SHROOM4Q9ULL8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC41.49■■■■■ 4.23
SHROOM4Q9ULL8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC41.49■■■■■ 4.23
SHROOM4Q9ULL8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC41.49■■■■■ 4.23
SHROOM4Q9ULL8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC41.48■■■■■ 4.23
SHROOM4Q9ULL8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC41.48■■■■■ 4.23
SHROOM4Q9ULL8 TESC-206ENST00000541210 936 ntTSL 3 BASIC41.48■■■■■ 4.23
SHROOM4Q9ULL8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC41.48■■■■■ 4.23
SHROOM4Q9ULL8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC41.48■■■■■ 4.23
SHROOM4Q9ULL8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC41.48■■■■■ 4.23
SHROOM4Q9ULL8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC41.47■■■■■ 4.23
SHROOM4Q9ULL8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC41.47■■■■■ 4.23
SHROOM4Q9ULL8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC41.47■■■■■ 4.23
SHROOM4Q9ULL8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC41.47■■■■■ 4.23
SHROOM4Q9ULL8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC41.47■■■■■ 4.23
SHROOM4Q9ULL8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC41.47■■■■■ 4.23
SHROOM4Q9ULL8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC41.47■■■■■ 4.23
SHROOM4Q9ULL8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC41.47■■■■■ 4.23
SHROOM4Q9ULL8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC41.47■■■■■ 4.23
SHROOM4Q9ULL8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC41.47■■■■■ 4.23
SHROOM4Q9ULL8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC41.46■■■■■ 4.23
SHROOM4Q9ULL8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC41.46■■■■■ 4.23
SHROOM4Q9ULL8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC41.46■■■■■ 4.23
SHROOM4Q9ULL8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC41.46■■■■■ 4.23
SHROOM4Q9ULL8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC41.46■■■■■ 4.23
SHROOM4Q9ULL8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC41.46■■■■■ 4.23
SHROOM4Q9ULL8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC41.46■■■■■ 4.23
SHROOM4Q9ULL8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC41.46■■■■■ 4.23
SHROOM4Q9ULL8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC41.46■■■■■ 4.23
SHROOM4Q9ULL8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC41.45■■■■■ 4.23
SHROOM4Q9ULL8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC41.45■■■■■ 4.23
SHROOM4Q9ULL8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC41.45■■■■■ 4.23
SHROOM4Q9ULL8 AC133041.1-202ENST00000642053 222 ntBASIC41.45■■■■■ 4.23
SHROOM4Q9ULL8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC41.45■■■■■ 4.23
SHROOM4Q9ULL8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC41.45■■■■■ 4.23
SHROOM4Q9ULL8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC41.45■■■■■ 4.23
SHROOM4Q9ULL8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC41.45■■■■■ 4.23
SHROOM4Q9ULL8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC41.45■■■■■ 4.23
SHROOM4Q9ULL8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC41.44■■■■■ 4.22
SHROOM4Q9ULL8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC41.44■■■■■ 4.22
SHROOM4Q9ULL8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC41.44■■■■■ 4.22
SHROOM4Q9ULL8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC41.43■■■■■ 4.22
SHROOM4Q9ULL8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC41.43■■■■■ 4.22
SHROOM4Q9ULL8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC41.43■■■■■ 4.22
SHROOM4Q9ULL8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC41.43■■■■■ 4.22
SHROOM4Q9ULL8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC41.43■■■■■ 4.22
SHROOM4Q9ULL8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC41.43■■■■■ 4.22
SHROOM4Q9ULL8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC41.43■■■■■ 4.22
SHROOM4Q9ULL8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC41.43■■■■■ 4.22
SHROOM4Q9ULL8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC41.43■■■■■ 4.22
SHROOM4Q9ULL8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC41.43■■■■■ 4.22
SHROOM4Q9ULL8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC41.43■■■■■ 4.22
SHROOM4Q9ULL8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC41.43■■■■■ 4.22
SHROOM4Q9ULL8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC41.43■■■■■ 4.22
SHROOM4Q9ULL8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC41.42■■■■■ 4.22
SHROOM4Q9ULL8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC41.42■■■■■ 4.22
SHROOM4Q9ULL8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC41.42■■■■■ 4.22
SHROOM4Q9ULL8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC41.42■■■■■ 4.22
SHROOM4Q9ULL8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC41.42■■■■■ 4.22
SHROOM4Q9ULL8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC41.42■■■■■ 4.22
SHROOM4Q9ULL8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC41.41■■■■■ 4.22
SHROOM4Q9ULL8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC41.41■■■■■ 4.22
SHROOM4Q9ULL8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC41.41■■■■■ 4.22
SHROOM4Q9ULL8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC41.41■■■■■ 4.22
SHROOM4Q9ULL8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC41.41■■■■■ 4.22
SHROOM4Q9ULL8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC41.4■■■■■ 4.22
SHROOM4Q9ULL8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC41.4■■■■■ 4.22
SHROOM4Q9ULL8 PRORSD1P-201ENST00000295112 541 ntBASIC41.4■■■■■ 4.22
SHROOM4Q9ULL8 AC079140.4-201ENST00000507448 529 ntBASIC41.4■■■■■ 4.22
SHROOM4Q9ULL8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC41.4■■■■■ 4.22
SHROOM4Q9ULL8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC41.4■■■■■ 4.22
SHROOM4Q9ULL8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC41.39■■■■■ 4.22
SHROOM4Q9ULL8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC41.39■■■■■ 4.22
SHROOM4Q9ULL8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC41.39■■■■■ 4.22
SHROOM4Q9ULL8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC41.39■■■■■ 4.22
SHROOM4Q9ULL8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC41.39■■■■■ 4.22
SHROOM4Q9ULL8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC41.39■■■■■ 4.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms