Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.92■□□□□ 0.94
SPHK1Q9NYA1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 ESRRAP2-201ENST00000418437 1549 ntBASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 YBX1P1-201ENST00000445822 960 ntBASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPHK1Q9NYA1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPHK1Q9NYA1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SPHK1Q9NYA1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SPHK1Q9NYA1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SPHK1Q9NYA1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPHK1Q9NYA1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPHK1Q9NYA1 AC139530.1-201ENST00000575312 1977 ntBASIC20.89■□□□□ 0.93
SPHK1Q9NYA1 AC080038.3-201ENST00000623346 1952 ntBASIC20.89■□□□□ 0.93
SPHK1Q9NYA1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPHK1Q9NYA1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPHK1Q9NYA1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.89■□□□□ 0.93
SPHK1Q9NYA1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.89■□□□□ 0.93
SPHK1Q9NYA1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPHK1Q9NYA1 BX005040.4-201ENST00000637145 1518 ntBASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPHK1Q9NYA1 OR7E47P-201ENST00000546390 1422 ntBASIC20.87■□□□□ 0.93
SPHK1Q9NYA1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.87■□□□□ 0.93
SPHK1Q9NYA1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPHK1Q9NYA1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPHK1Q9NYA1 AC123595.1-201ENST00000440769 1046 ntBASIC20.87■□□□□ 0.93
SPHK1Q9NYA1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SPHK1Q9NYA1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPHK1Q9NYA1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPHK1Q9NYA1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPHK1Q9NYA1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.87■□□□□ 0.93
SPHK1Q9NYA1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPHK1Q9NYA1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPHK1Q9NYA1 AC127496.7-201ENST00000625110 1798 ntBASIC20.87■□□□□ 0.93
SPHK1Q9NYA1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 TPRG1LP1-201ENST00000598702 760 ntBASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPHK1Q9NYA1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPHK1Q9NYA1 AC133561.1-201ENST00000568600 2415 ntBASIC20.85■□□□□ 0.93
SPHK1Q9NYA1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPHK1Q9NYA1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms