Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 KRT87P-202ENST00000534226 1464 ntBASIC22.7■■□□□ 1.22
HCFC1R1Q9NWW0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.7■■□□□ 1.22
HCFC1R1Q9NWW0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.7■■□□□ 1.22
HCFC1R1Q9NWW0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.69■■□□□ 1.22
HCFC1R1Q9NWW0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HCFC1R1Q9NWW0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
HCFC1R1Q9NWW0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
HCFC1R1Q9NWW0 AC009237.3-201ENST00000393279 1427 ntBASIC22.69■■□□□ 1.22
HCFC1R1Q9NWW0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
HCFC1R1Q9NWW0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.69■■□□□ 1.22
HCFC1R1Q9NWW0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HCFC1R1Q9NWW0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
HCFC1R1Q9NWW0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.69■■□□□ 1.22
HCFC1R1Q9NWW0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HCFC1R1Q9NWW0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.68■■□□□ 1.22
HCFC1R1Q9NWW0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HCFC1R1Q9NWW0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
HCFC1R1Q9NWW0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.68■■□□□ 1.22
HCFC1R1Q9NWW0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HCFC1R1Q9NWW0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.68■■□□□ 1.22
HCFC1R1Q9NWW0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HCFC1R1Q9NWW0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HCFC1R1Q9NWW0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
HCFC1R1Q9NWW0 DUSP8P5-201ENST00000422884 1815 ntBASIC22.68■■□□□ 1.22
HCFC1R1Q9NWW0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.67■■□□□ 1.22
HCFC1R1Q9NWW0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HCFC1R1Q9NWW0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HCFC1R1Q9NWW0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.67■■□□□ 1.22
HCFC1R1Q9NWW0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
HCFC1R1Q9NWW0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HCFC1R1Q9NWW0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HCFC1R1Q9NWW0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HCFC1R1Q9NWW0 AC092068.2-201ENST00000590491 1708 ntBASIC22.67■■□□□ 1.22
HCFC1R1Q9NWW0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.67■■□□□ 1.22
HCFC1R1Q9NWW0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.67■■□□□ 1.22
HCFC1R1Q9NWW0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
HCFC1R1Q9NWW0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HCFC1R1Q9NWW0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
HCFC1R1Q9NWW0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.66■■□□□ 1.22
HCFC1R1Q9NWW0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.66■■□□□ 1.22
HCFC1R1Q9NWW0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HCFC1R1Q9NWW0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HCFC1R1Q9NWW0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
HCFC1R1Q9NWW0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
HCFC1R1Q9NWW0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 UBE2DNL-204ENST00000602536 740 ntBASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
HCFC1R1Q9NWW0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
HCFC1R1Q9NWW0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
HCFC1R1Q9NWW0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.64■■□□□ 1.21
HCFC1R1Q9NWW0 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.64■■□□□ 1.21
HCFC1R1Q9NWW0 AL050303.2-201ENST00000619798 666 ntBASIC22.64■■□□□ 1.21
HCFC1R1Q9NWW0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HCFC1R1Q9NWW0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HCFC1R1Q9NWW0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 LINC01960-201ENST00000563759 1884 ntBASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
HCFC1R1Q9NWW0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HCFC1R1Q9NWW0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HCFC1R1Q9NWW0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.62■■□□□ 1.21
HCFC1R1Q9NWW0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HCFC1R1Q9NWW0 GPX1P1-201ENST00000388829 606 ntBASIC22.62■■□□□ 1.21
HCFC1R1Q9NWW0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
HCFC1R1Q9NWW0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.62■■□□□ 1.21
HCFC1R1Q9NWW0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HCFC1R1Q9NWW0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HCFC1R1Q9NWW0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HCFC1R1Q9NWW0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HCFC1R1Q9NWW0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
HCFC1R1Q9NWW0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
HCFC1R1Q9NWW0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HCFC1R1Q9NWW0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.61■■□□□ 1.21
HCFC1R1Q9NWW0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms