Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
SPTLC3Q9NUV7 MIR4508-201ENST00000584178 70 ntBASIC23.85■■□□□ 1.41
SPTLC3Q9NUV7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.85■■□□□ 1.41
SPTLC3Q9NUV7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SPTLC3Q9NUV7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SPTLC3Q9NUV7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.84■■□□□ 1.41
SPTLC3Q9NUV7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SPTLC3Q9NUV7 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.84■■□□□ 1.41
SPTLC3Q9NUV7 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.84■■□□□ 1.41
SPTLC3Q9NUV7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SPTLC3Q9NUV7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.84■■□□□ 1.41
SPTLC3Q9NUV7 AC103834.1-201ENST00000520383 144 ntBASIC23.84■■□□□ 1.41
SPTLC3Q9NUV7 AL391422.3-201ENST00000603791 2761 ntBASIC23.84■■□□□ 1.41
SPTLC3Q9NUV7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
SPTLC3Q9NUV7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SPTLC3Q9NUV7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SPTLC3Q9NUV7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.83■■□□□ 1.41
SPTLC3Q9NUV7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.83■■□□□ 1.41
SPTLC3Q9NUV7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SPTLC3Q9NUV7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SPTLC3Q9NUV7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.83■■□□□ 1.41
SPTLC3Q9NUV7 AC144652.1-201ENST00000609974 1624 ntBASIC23.83■■□□□ 1.41
SPTLC3Q9NUV7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.83■■□□□ 1.41
SPTLC3Q9NUV7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SPTLC3Q9NUV7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
SPTLC3Q9NUV7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SPTLC3Q9NUV7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SPTLC3Q9NUV7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SPTLC3Q9NUV7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPTLC3Q9NUV7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SPTLC3Q9NUV7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
SPTLC3Q9NUV7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
SPTLC3Q9NUV7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPTLC3Q9NUV7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPTLC3Q9NUV7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPTLC3Q9NUV7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.4
SPTLC3Q9NUV7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.82■■□□□ 1.4
SPTLC3Q9NUV7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.82■■□□□ 1.4
SPTLC3Q9NUV7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPTLC3Q9NUV7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPTLC3Q9NUV7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SPTLC3Q9NUV7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SPTLC3Q9NUV7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPTLC3Q9NUV7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPTLC3Q9NUV7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.81■■□□□ 1.4
SPTLC3Q9NUV7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPTLC3Q9NUV7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPTLC3Q9NUV7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.81■■□□□ 1.4
SPTLC3Q9NUV7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.81■■□□□ 1.4
SPTLC3Q9NUV7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.81■■□□□ 1.4
SPTLC3Q9NUV7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SPTLC3Q9NUV7 KRT8P33-201ENST00000508125 1423 ntBASIC23.81■■□□□ 1.4
SPTLC3Q9NUV7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPTLC3Q9NUV7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.8■■□□□ 1.4
SPTLC3Q9NUV7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SPTLC3Q9NUV7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SPTLC3Q9NUV7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SPTLC3Q9NUV7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.8■■□□□ 1.4
SPTLC3Q9NUV7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.8■■□□□ 1.4
SPTLC3Q9NUV7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.8■■□□□ 1.4
SPTLC3Q9NUV7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SPTLC3Q9NUV7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SPTLC3Q9NUV7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
SPTLC3Q9NUV7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SPTLC3Q9NUV7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SPTLC3Q9NUV7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SPTLC3Q9NUV7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 AC103724.3-201ENST00000564481 992 ntBASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 AL033527.3-201ENST00000566366 1196 ntBASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPTLC3Q9NUV7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPTLC3Q9NUV7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPTLC3Q9NUV7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SPTLC3Q9NUV7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPTLC3Q9NUV7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SPTLC3Q9NUV7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
SPTLC3Q9NUV7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.78■■□□□ 1.4
SPTLC3Q9NUV7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SPTLC3Q9NUV7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPTLC3Q9NUV7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
SPTLC3Q9NUV7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPTLC3Q9NUV7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SPTLC3Q9NUV7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SPTLC3Q9NUV7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.78■■□□□ 1.4
SPTLC3Q9NUV7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.78■■□□□ 1.4
SPTLC3Q9NUV7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
SPTLC3Q9NUV7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPTLC3Q9NUV7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms