Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC42SE2Q9NRR3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC42SE2Q9NRR3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDC42SE2Q9NRR3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDC42SE2Q9NRR3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 Z92544.1-202ENST00000571933 1220 ntBASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 AL499627.2-201ENST00000606283 725 ntBASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC42SE2Q9NRR3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 CD72-202ENST00000378430 585 ntTSL 3 BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 HES6-204ENST00000409182 863 ntTSL 2 BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 AC005229.4-201ENST00000610085 2198 ntBASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42SE2Q9NRR3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42SE2Q9NRR3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42SE2Q9NRR3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 MIR4787-201ENST00000607364 84 ntBASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 AC010997.5-201ENST00000609182 354 ntBASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC14.87□□□□□ -0.03
CDC42SE2Q9NRR3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms