Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDLIM7Q9NR12 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.46■■□□□ 1.51
PDLIM7Q9NR12 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDLIM7Q9NR12 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PDLIM7Q9NR12 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PDLIM7Q9NR12 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
PDLIM7Q9NR12 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PDLIM7Q9NR12 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDLIM7Q9NR12 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
PDLIM7Q9NR12 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
PDLIM7Q9NR12 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
PDLIM7Q9NR12 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.45■■□□□ 1.5
PDLIM7Q9NR12 KRT18P11-201ENST00000435214 1283 ntBASIC24.45■■□□□ 1.5
PDLIM7Q9NR12 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.45■■□□□ 1.5
PDLIM7Q9NR12 SPI1-203ENST00000533030 661 ntTSL 2 BASIC24.45■■□□□ 1.5
PDLIM7Q9NR12 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.45■■□□□ 1.5
PDLIM7Q9NR12 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
PDLIM7Q9NR12 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
PDLIM7Q9NR12 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDLIM7Q9NR12 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PDLIM7Q9NR12 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.44■■□□□ 1.5
PDLIM7Q9NR12 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDLIM7Q9NR12 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PDLIM7Q9NR12 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDLIM7Q9NR12 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.44■■□□□ 1.5
PDLIM7Q9NR12 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.44■■□□□ 1.5
PDLIM7Q9NR12 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.44■■□□□ 1.5
PDLIM7Q9NR12 BX005040.4-201ENST00000637145 1518 ntBASIC24.44■■□□□ 1.5
PDLIM7Q9NR12 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PDLIM7Q9NR12 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.43■■□□□ 1.5
PDLIM7Q9NR12 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDLIM7Q9NR12 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDLIM7Q9NR12 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.43■■□□□ 1.5
PDLIM7Q9NR12 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.43■■□□□ 1.5
PDLIM7Q9NR12 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
PDLIM7Q9NR12 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDLIM7Q9NR12 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.43■■□□□ 1.5
PDLIM7Q9NR12 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.43■■□□□ 1.5
PDLIM7Q9NR12 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDLIM7Q9NR12 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PDLIM7Q9NR12 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
PDLIM7Q9NR12 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PDLIM7Q9NR12 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PDLIM7Q9NR12 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.42■■□□□ 1.5
PDLIM7Q9NR12 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.42■■□□□ 1.5
PDLIM7Q9NR12 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.42■■□□□ 1.5
PDLIM7Q9NR12 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PDLIM7Q9NR12 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
PDLIM7Q9NR12 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PDLIM7Q9NR12 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
PDLIM7Q9NR12 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.42■■□□□ 1.5
PDLIM7Q9NR12 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.42■■□□□ 1.5
PDLIM7Q9NR12 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDLIM7Q9NR12 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.42■■□□□ 1.5
PDLIM7Q9NR12 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDLIM7Q9NR12 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDLIM7Q9NR12 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PDLIM7Q9NR12 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDLIM7Q9NR12 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
PDLIM7Q9NR12 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
PDLIM7Q9NR12 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDLIM7Q9NR12 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PDLIM7Q9NR12 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.41■■□□□ 1.5
PDLIM7Q9NR12 KRT18P6-201ENST00000555540 1265 ntBASIC24.41■■□□□ 1.5
PDLIM7Q9NR12 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PDLIM7Q9NR12 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
PDLIM7Q9NR12 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDLIM7Q9NR12 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.4■■□□□ 1.5
PDLIM7Q9NR12 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDLIM7Q9NR12 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
PDLIM7Q9NR12 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDLIM7Q9NR12 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDLIM7Q9NR12 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
PDLIM7Q9NR12 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.4■■□□□ 1.5
PDLIM7Q9NR12 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.4■■□□□ 1.5
PDLIM7Q9NR12 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.4■■□□□ 1.5
PDLIM7Q9NR12 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PDLIM7Q9NR12 AL050303.2-201ENST00000619798 666 ntBASIC24.4■■□□□ 1.5
PDLIM7Q9NR12 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
PDLIM7Q9NR12 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PDLIM7Q9NR12 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.39■■□□□ 1.5
PDLIM7Q9NR12 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
PDLIM7Q9NR12 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.39■■□□□ 1.49
PDLIM7Q9NR12 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDLIM7Q9NR12 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDLIM7Q9NR12 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.38■■□□□ 1.49
PDLIM7Q9NR12 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDLIM7Q9NR12 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDLIM7Q9NR12 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDLIM7Q9NR12 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDLIM7Q9NR12 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDLIM7Q9NR12 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.38■■□□□ 1.49
PDLIM7Q9NR12 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.38■■□□□ 1.49
PDLIM7Q9NR12 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC24.38■■□□□ 1.49
PDLIM7Q9NR12 AL121832.2-201ENST00000610979 668 ntBASIC24.38■■□□□ 1.49
PDLIM7Q9NR12 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.38■■□□□ 1.49
PDLIM7Q9NR12 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDLIM7Q9NR12 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDLIM7Q9NR12 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDLIM7Q9NR12 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms