Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
VRTNQ9H8Y1 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.19■■□□□ 1.3
VRTNQ9H8Y1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
VRTNQ9H8Y1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.19■■□□□ 1.3
VRTNQ9H8Y1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.19■■□□□ 1.3
VRTNQ9H8Y1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.19■■□□□ 1.3
VRTNQ9H8Y1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
VRTNQ9H8Y1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
VRTNQ9H8Y1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
VRTNQ9H8Y1 AC242852.2-201ENST00000615738 1807 ntBASIC23.18■■□□□ 1.3
VRTNQ9H8Y1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VRTNQ9H8Y1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VRTNQ9H8Y1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VRTNQ9H8Y1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
VRTNQ9H8Y1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.18■■□□□ 1.3
VRTNQ9H8Y1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.18■■□□□ 1.3
VRTNQ9H8Y1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VRTNQ9H8Y1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.17■■□□□ 1.3
VRTNQ9H8Y1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.17■■□□□ 1.3
VRTNQ9H8Y1 GUSBP5-202ENST00000510805 1989 ntBASIC23.17■■□□□ 1.3
VRTNQ9H8Y1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
VRTNQ9H8Y1 BX005040.4-201ENST00000637145 1518 ntBASIC23.17■■□□□ 1.3
VRTNQ9H8Y1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
VRTNQ9H8Y1 AC133561.1-201ENST00000568600 2415 ntBASIC23.17■■□□□ 1.3
VRTNQ9H8Y1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VRTNQ9H8Y1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
VRTNQ9H8Y1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VRTNQ9H8Y1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VRTNQ9H8Y1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VRTNQ9H8Y1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.16■■□□□ 1.3
VRTNQ9H8Y1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
VRTNQ9H8Y1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VRTNQ9H8Y1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VRTNQ9H8Y1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.16■■□□□ 1.3
VRTNQ9H8Y1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VRTNQ9H8Y1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VRTNQ9H8Y1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
VRTNQ9H8Y1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VRTNQ9H8Y1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VRTNQ9H8Y1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VRTNQ9H8Y1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VRTNQ9H8Y1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
VRTNQ9H8Y1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
VRTNQ9H8Y1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
VRTNQ9H8Y1 TPRG1LP1-201ENST00000598702 760 ntBASIC23.15■■□□□ 1.3
VRTNQ9H8Y1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VRTNQ9H8Y1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
VRTNQ9H8Y1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VRTNQ9H8Y1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.15■■□□□ 1.3
VRTNQ9H8Y1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VRTNQ9H8Y1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.15■■□□□ 1.3
VRTNQ9H8Y1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VRTNQ9H8Y1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VRTNQ9H8Y1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.14■■□□□ 1.3
VRTNQ9H8Y1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
VRTNQ9H8Y1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.14■■□□□ 1.3
VRTNQ9H8Y1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VRTNQ9H8Y1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.14■■□□□ 1.29
VRTNQ9H8Y1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VRTNQ9H8Y1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
VRTNQ9H8Y1 AC123595.1-201ENST00000440769 1046 ntBASIC23.14■■□□□ 1.29
VRTNQ9H8Y1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.14■■□□□ 1.29
VRTNQ9H8Y1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.14■■□□□ 1.29
VRTNQ9H8Y1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
VRTNQ9H8Y1 MIR6084-201ENST00000622012 110 ntBASIC23.14■■□□□ 1.29
VRTNQ9H8Y1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
VRTNQ9H8Y1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
VRTNQ9H8Y1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VRTNQ9H8Y1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.14■■□□□ 1.29
VRTNQ9H8Y1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.29
VRTNQ9H8Y1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.13■■□□□ 1.29
VRTNQ9H8Y1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VRTNQ9H8Y1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.13■■□□□ 1.29
VRTNQ9H8Y1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VRTNQ9H8Y1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VRTNQ9H8Y1 YBX1P1-201ENST00000445822 960 ntBASIC23.13■■□□□ 1.29
VRTNQ9H8Y1 AL034346.1-201ENST00000568244 1277 ntBASIC23.13■■□□□ 1.29
VRTNQ9H8Y1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VRTNQ9H8Y1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
VRTNQ9H8Y1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
VRTNQ9H8Y1 ECEL1P1-201ENST00000373592 1742 ntBASIC23.13■■□□□ 1.29
VRTNQ9H8Y1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.13■■□□□ 1.29
VRTNQ9H8Y1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VRTNQ9H8Y1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VRTNQ9H8Y1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VRTNQ9H8Y1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VRTNQ9H8Y1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VRTNQ9H8Y1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
VRTNQ9H8Y1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.12■■□□□ 1.29
VRTNQ9H8Y1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.12■■□□□ 1.29
VRTNQ9H8Y1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.12■■□□□ 1.29
VRTNQ9H8Y1 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.12■■□□□ 1.29
VRTNQ9H8Y1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
VRTNQ9H8Y1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.12■■□□□ 1.29
VRTNQ9H8Y1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
VRTNQ9H8Y1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VRTNQ9H8Y1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VRTNQ9H8Y1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.11■■□□□ 1.29
VRTNQ9H8Y1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VRTNQ9H8Y1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms