Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNDIG1Q9H7V2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYNDIG1Q9H7V2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 BX005040.4-201ENST00000637145 1518 ntBASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 AC010141.3-201ENST00000456659 717 ntBASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 TPRG1LP1-201ENST00000598702 760 ntBASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.15■□□□□ 0.98
SYNDIG1Q9H7V2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SYNDIG1Q9H7V2 AC004854.2-201ENST00000608450 1441 ntBASIC21.14■□□□□ 0.98
SYNDIG1Q9H7V2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.14■□□□□ 0.98
SYNDIG1Q9H7V2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNDIG1Q9H7V2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SYNDIG1Q9H7V2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SYNDIG1Q9H7V2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.14■□□□□ 0.97
SYNDIG1Q9H7V2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SYNDIG1Q9H7V2 KRT18P61-201ENST00000585825 1298 ntBASIC21.14■□□□□ 0.97
SYNDIG1Q9H7V2 AC068587.7-201ENST00000641602 218 ntBASIC21.14■□□□□ 0.97
SYNDIG1Q9H7V2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SYNDIG1Q9H7V2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNDIG1Q9H7V2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNDIG1Q9H7V2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SYNDIG1Q9H7V2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.14■□□□□ 0.97
SYNDIG1Q9H7V2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.14■□□□□ 0.97
SYNDIG1Q9H7V2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SYNDIG1Q9H7V2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNDIG1Q9H7V2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYNDIG1Q9H7V2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SYNDIG1Q9H7V2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNDIG1Q9H7V2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SYNDIG1Q9H7V2 HLA-L-209ENST00000420110 1011 ntBASIC21.13■□□□□ 0.97
SYNDIG1Q9H7V2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.13■□□□□ 0.97
SYNDIG1Q9H7V2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.13■□□□□ 0.97
SYNDIG1Q9H7V2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.13■□□□□ 0.97
SYNDIG1Q9H7V2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.13■□□□□ 0.97
SYNDIG1Q9H7V2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNDIG1Q9H7V2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYNDIG1Q9H7V2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SYNDIG1Q9H7V2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SYNDIG1Q9H7V2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SYNDIG1Q9H7V2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
SYNDIG1Q9H7V2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SYNDIG1Q9H7V2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.11■□□□□ 0.97
SYNDIG1Q9H7V2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SYNDIG1Q9H7V2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.11■□□□□ 0.97
SYNDIG1Q9H7V2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.11■□□□□ 0.97
SYNDIG1Q9H7V2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SYNDIG1Q9H7V2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SYNDIG1Q9H7V2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SYNDIG1Q9H7V2 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.1■□□□□ 0.97
SYNDIG1Q9H7V2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNDIG1Q9H7V2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SYNDIG1Q9H7V2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.1■□□□□ 0.97
SYNDIG1Q9H7V2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.1■□□□□ 0.97
SYNDIG1Q9H7V2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
SYNDIG1Q9H7V2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.1■□□□□ 0.97
SYNDIG1Q9H7V2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SYNDIG1Q9H7V2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNDIG1Q9H7V2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNDIG1Q9H7V2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNDIG1Q9H7V2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.09■□□□□ 0.97
SYNDIG1Q9H7V2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.09■□□□□ 0.97
SYNDIG1Q9H7V2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SYNDIG1Q9H7V2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
SYNDIG1Q9H7V2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNDIG1Q9H7V2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNDIG1Q9H7V2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.09■□□□□ 0.97
SYNDIG1Q9H7V2 SMUG1P1-201ENST00000590640 811 ntBASIC21.09■□□□□ 0.97
SYNDIG1Q9H7V2 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.09■□□□□ 0.97
SYNDIG1Q9H7V2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.09■□□□□ 0.97
SYNDIG1Q9H7V2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SYNDIG1Q9H7V2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms