Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPP1R3EQ9H7J1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.15■□□□□ 0.66
PPP1R3EQ9H7J1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PPP1R3EQ9H7J1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPP1R3EQ9H7J1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PPP1R3EQ9H7J1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPP1R3EQ9H7J1 GUSBP5-201ENST00000418136 578 ntBASIC19.15■□□□□ 0.66
PPP1R3EQ9H7J1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPP1R3EQ9H7J1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPP1R3EQ9H7J1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.15■□□□□ 0.66
PPP1R3EQ9H7J1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.14■□□□□ 0.66
PPP1R3EQ9H7J1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
PPP1R3EQ9H7J1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PPP1R3EQ9H7J1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPP1R3EQ9H7J1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPP1R3EQ9H7J1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPP1R3EQ9H7J1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPP1R3EQ9H7J1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.14■□□□□ 0.65
PPP1R3EQ9H7J1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.14■□□□□ 0.65
PPP1R3EQ9H7J1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.14■□□□□ 0.65
PPP1R3EQ9H7J1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPP1R3EQ9H7J1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
PPP1R3EQ9H7J1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPP1R3EQ9H7J1 AL157384.1-201ENST00000445995 2473 ntBASIC19.14■□□□□ 0.65
PPP1R3EQ9H7J1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPP1R3EQ9H7J1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPP1R3EQ9H7J1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.14■□□□□ 0.65
PPP1R3EQ9H7J1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP1R3EQ9H7J1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PPP1R3EQ9H7J1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PPP1R3EQ9H7J1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP1R3EQ9H7J1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP1R3EQ9H7J1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.13■□□□□ 0.65
PPP1R3EQ9H7J1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.13■□□□□ 0.65
PPP1R3EQ9H7J1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.13■□□□□ 0.65
PPP1R3EQ9H7J1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.13■□□□□ 0.65
PPP1R3EQ9H7J1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PPP1R3EQ9H7J1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
PPP1R3EQ9H7J1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP1R3EQ9H7J1 LINC01521-201ENST00000504184 1943 ntBASIC19.13■□□□□ 0.65
PPP1R3EQ9H7J1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.13■□□□□ 0.65
PPP1R3EQ9H7J1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP1R3EQ9H7J1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PPP1R3EQ9H7J1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP1R3EQ9H7J1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP1R3EQ9H7J1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPP1R3EQ9H7J1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP1R3EQ9H7J1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPP1R3EQ9H7J1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.12■□□□□ 0.65
PPP1R3EQ9H7J1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.12■□□□□ 0.65
PPP1R3EQ9H7J1 KRT16P3-201ENST00000439127 1283 ntBASIC19.12■□□□□ 0.65
PPP1R3EQ9H7J1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.12■□□□□ 0.65
PPP1R3EQ9H7J1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP1R3EQ9H7J1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP1R3EQ9H7J1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP1R3EQ9H7J1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.12■□□□□ 0.65
PPP1R3EQ9H7J1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 MIR6724-1-201ENST00000616420 92 ntBASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 MIR6724-2-201ENST00000616483 92 ntBASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 MIR6724-4-201ENST00000617390 92 ntBASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 MIR6724-3-201ENST00000622482 92 ntBASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 AC244015.2-201ENST00000616358 1861 ntBASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PPP1R3EQ9H7J1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP1R3EQ9H7J1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP1R3EQ9H7J1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PPP1R3EQ9H7J1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP1R3EQ9H7J1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.1■□□□□ 0.65
PPP1R3EQ9H7J1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.1■□□□□ 0.65
PPP1R3EQ9H7J1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
PPP1R3EQ9H7J1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.1■□□□□ 0.65
PPP1R3EQ9H7J1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP1R3EQ9H7J1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PPP1R3EQ9H7J1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP1R3EQ9H7J1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP1R3EQ9H7J1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
PPP1R3EQ9H7J1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.09■□□□□ 0.65
PPP1R3EQ9H7J1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.09■□□□□ 0.65
PPP1R3EQ9H7J1 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.09■□□□□ 0.65
PPP1R3EQ9H7J1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP1R3EQ9H7J1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP1R3EQ9H7J1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP1R3EQ9H7J1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms