Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.35■■□□□ 1.65
SH2D4AQ9H788 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.35■■□□□ 1.65
SH2D4AQ9H788 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SH2D4AQ9H788 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
SH2D4AQ9H788 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.35■■□□□ 1.65
SH2D4AQ9H788 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
SH2D4AQ9H788 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SH2D4AQ9H788 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
SH2D4AQ9H788 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SH2D4AQ9H788 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.34■■□□□ 1.65
SH2D4AQ9H788 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SH2D4AQ9H788 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
SH2D4AQ9H788 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.34■■□□□ 1.65
SH2D4AQ9H788 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.34■■□□□ 1.65
SH2D4AQ9H788 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.34■■□□□ 1.65
SH2D4AQ9H788 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SH2D4AQ9H788 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SH2D4AQ9H788 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.34■■□□□ 1.65
SH2D4AQ9H788 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SH2D4AQ9H788 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SH2D4AQ9H788 AC005224.4-201ENST00000583262 1652 ntBASIC25.33■■□□□ 1.65
SH2D4AQ9H788 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.33■■□□□ 1.65
SH2D4AQ9H788 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
SH2D4AQ9H788 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
SH2D4AQ9H788 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
SH2D4AQ9H788 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SH2D4AQ9H788 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.33■■□□□ 1.65
SH2D4AQ9H788 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.33■■□□□ 1.65
SH2D4AQ9H788 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
SH2D4AQ9H788 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SH2D4AQ9H788 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
SH2D4AQ9H788 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
SH2D4AQ9H788 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SH2D4AQ9H788 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
SH2D4AQ9H788 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SH2D4AQ9H788 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SH2D4AQ9H788 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
SH2D4AQ9H788 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.32■■□□□ 1.64
SH2D4AQ9H788 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SH2D4AQ9H788 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.32■■□□□ 1.64
SH2D4AQ9H788 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.32■■□□□ 1.64
SH2D4AQ9H788 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.32■■□□□ 1.64
SH2D4AQ9H788 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
SH2D4AQ9H788 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
SH2D4AQ9H788 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH2D4AQ9H788 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH2D4AQ9H788 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH2D4AQ9H788 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.31■■□□□ 1.64
SH2D4AQ9H788 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH2D4AQ9H788 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.31■■□□□ 1.64
SH2D4AQ9H788 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.31■■□□□ 1.64
SH2D4AQ9H788 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH2D4AQ9H788 AC079089.2-201ENST00000531211 1277 ntBASIC25.31■■□□□ 1.64
SH2D4AQ9H788 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SH2D4AQ9H788 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH2D4AQ9H788 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.31■■□□□ 1.64
SH2D4AQ9H788 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH2D4AQ9H788 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SH2D4AQ9H788 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
SH2D4AQ9H788 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SH2D4AQ9H788 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.3■■□□□ 1.64
SH2D4AQ9H788 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.3■■□□□ 1.64
SH2D4AQ9H788 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
SH2D4AQ9H788 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SH2D4AQ9H788 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SH2D4AQ9H788 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.3■■□□□ 1.64
SH2D4AQ9H788 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SH2D4AQ9H788 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SH2D4AQ9H788 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.3■■□□□ 1.64
SH2D4AQ9H788 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
SH2D4AQ9H788 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.29■■□□□ 1.64
SH2D4AQ9H788 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SH2D4AQ9H788 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SH2D4AQ9H788 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.29■■□□□ 1.64
SH2D4AQ9H788 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.29■■□□□ 1.64
SH2D4AQ9H788 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.29■■□□□ 1.64
SH2D4AQ9H788 AC080038.1-201ENST00000611274 1154 ntBASIC25.29■■□□□ 1.64
SH2D4AQ9H788 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.29■■□□□ 1.64
SH2D4AQ9H788 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SH2D4AQ9H788 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SH2D4AQ9H788 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SH2D4AQ9H788 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SH2D4AQ9H788 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SH2D4AQ9H788 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.28■■□□□ 1.64
SH2D4AQ9H788 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.28■■□□□ 1.64
SH2D4AQ9H788 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.28■■□□□ 1.64
SH2D4AQ9H788 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SH2D4AQ9H788 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.28■■□□□ 1.64
SH2D4AQ9H788 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SH2D4AQ9H788 KRT87P-202ENST00000534226 1464 ntBASIC25.28■■□□□ 1.64
SH2D4AQ9H788 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SH2D4AQ9H788 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SH2D4AQ9H788 KRT18P11-201ENST00000435214 1283 ntBASIC25.27■■□□□ 1.64
SH2D4AQ9H788 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.27■■□□□ 1.64
SH2D4AQ9H788 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SH2D4AQ9H788 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
SH2D4AQ9H788 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SH2D4AQ9H788 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SH2D4AQ9H788 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SH2D4AQ9H788 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms