Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBQLN3Q9H347 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.08■□□□□ 0.81
UBQLN3Q9H347 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBQLN3Q9H347 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBQLN3Q9H347 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.08■□□□□ 0.81
UBQLN3Q9H347 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.08■□□□□ 0.81
UBQLN3Q9H347 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBQLN3Q9H347 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.08■□□□□ 0.81
UBQLN3Q9H347 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.08■□□□□ 0.81
UBQLN3Q9H347 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.08■□□□□ 0.81
UBQLN3Q9H347 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
UBQLN3Q9H347 AC010525.1-201ENST00000585559 441 ntBASIC20.08■□□□□ 0.81
UBQLN3Q9H347 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UBQLN3Q9H347 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBQLN3Q9H347 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBQLN3Q9H347 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBQLN3Q9H347 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBQLN3Q9H347 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN3Q9H347 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.07■□□□□ 0.8
UBQLN3Q9H347 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
UBQLN3Q9H347 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.07■□□□□ 0.8
UBQLN3Q9H347 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN3Q9H347 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.07■□□□□ 0.8
UBQLN3Q9H347 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.07■□□□□ 0.8
UBQLN3Q9H347 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.07■□□□□ 0.8
UBQLN3Q9H347 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.07■□□□□ 0.8
UBQLN3Q9H347 AC126544.1-201ENST00000580842 1059 ntBASIC20.07■□□□□ 0.8
UBQLN3Q9H347 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN3Q9H347 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN3Q9H347 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
UBQLN3Q9H347 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBQLN3Q9H347 AC139530.1-201ENST00000575312 1977 ntBASIC20.06■□□□□ 0.8
UBQLN3Q9H347 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.06■□□□□ 0.8
UBQLN3Q9H347 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN3Q9H347 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN3Q9H347 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN3Q9H347 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UBQLN3Q9H347 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.06■□□□□ 0.8
UBQLN3Q9H347 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.06■□□□□ 0.8
UBQLN3Q9H347 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN3Q9H347 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBQLN3Q9H347 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
UBQLN3Q9H347 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN3Q9H347 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN3Q9H347 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN3Q9H347 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN3Q9H347 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN3Q9H347 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.05■□□□□ 0.8
UBQLN3Q9H347 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
UBQLN3Q9H347 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
UBQLN3Q9H347 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN3Q9H347 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBQLN3Q9H347 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.04■□□□□ 0.8
UBQLN3Q9H347 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN3Q9H347 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN3Q9H347 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN3Q9H347 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.04■□□□□ 0.8
UBQLN3Q9H347 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
UBQLN3Q9H347 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.04■□□□□ 0.8
UBQLN3Q9H347 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.04■□□□□ 0.8
UBQLN3Q9H347 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.04■□□□□ 0.8
UBQLN3Q9H347 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.04■□□□□ 0.8
UBQLN3Q9H347 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN3Q9H347 AC004687.1-201ENST00000579003 1625 ntBASIC20.04■□□□□ 0.8
UBQLN3Q9H347 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
UBQLN3Q9H347 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
UBQLN3Q9H347 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN3Q9H347 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.04■□□□□ 0.8
UBQLN3Q9H347 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 AC087742.1-201ENST00000575880 1738 ntBASIC20.03■□□□□ 0.8
UBQLN3Q9H347 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 IGHV3-19-201ENST00000521488 291 ntBASIC20.03■□□□□ 0.8
UBQLN3Q9H347 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 AC080038.3-201ENST00000623346 1952 ntBASIC20.03■□□□□ 0.8
UBQLN3Q9H347 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN3Q9H347 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBQLN3Q9H347 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
UBQLN3Q9H347 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
UBQLN3Q9H347 AC092053.2-201ENST00000640557 1818 ntBASIC20.02■□□□□ 0.8
UBQLN3Q9H347 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBQLN3Q9H347 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBQLN3Q9H347 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBQLN3Q9H347 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
UBQLN3Q9H347 IRS3P-201ENST00000223076 1006 ntBASIC20.02■□□□□ 0.8
UBQLN3Q9H347 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms