Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC073544.1-201ENST00000600110 1595 ntBASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 AC093726.2-201ENST00000609134 679 ntBASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 INE2-201ENST00000630399 1874 ntBASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 CENPS-201ENST00000309048 896 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 FCRLA-203ENST00000309691 901 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 Y_RNA.318-201ENST00000365131 97 ntBASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 HNRNPDLP2-201ENST00000455248 751 ntBASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 AC104113.1-201ENST00000607723 479 ntBASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 AP001962.1-201ENST00000624114 559 ntBASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
KRTAP3-3Q9BYR6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 CASC20-201ENST00000415932 1484 ntTSL 5 BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 CR382285.2-201ENST00000624662 1495 ntBASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 TPT1P10-201ENST00000312966 496 ntBASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 AL117382.1-201ENST00000438702 754 ntTSL 5 BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 AC138089.1-201ENST00000450847 967 ntTSL 2 BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 AC004232.2-201ENST00000574245 821 ntBASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC13.24□□□□□ -0.29
KRTAP3-3Q9BYR6 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 AL353732.1-201ENST00000569618 1459 ntBASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 MTND4P26-201ENST00000415971 1359 ntBASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 AL021707.2-203ENST00000444381 1325 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 AC009800.1-201ENST00000511357 1006 ntBASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 MRPS36P5-201ENST00000551909 298 ntBASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 Z93930.3-201ENST00000607919 749 ntBASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 AL121895.2-201ENST00000619558 447 ntBASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 AL161658.1-201ENST00000623641 1967 ntBASIC13.23□□□□□ -0.29
KRTAP3-3Q9BYR6 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 LINC00941-201ENST00000547804 1645 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 RNU6-694P-201ENST00000364071 147 ntBASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 NPHP1-205ENST00000418527 742 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 RPS3AP44-201ENST00000425466 790 ntBASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 AC089999.1-201ENST00000460336 374 ntBASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 AC021146.8-201ENST00000507455 733 ntBASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 AC021106.1-201ENST00000509020 1058 ntBASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 AC012150.1-201ENST00000553075 593 ntTSL 4 BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 AC011477.4-201ENST00000590274 609 ntTSL 3 BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 DNAJC19P3-201ENST00000594491 331 ntBASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 AC007038.2-201ENST00000608095 740 ntBASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 AL365181.4-201ENST00000609800 547 ntBASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 AC120338.1-201ENST00000625074 1541 ntBASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC13.22□□□□□ -0.29
KRTAP3-3Q9BYR6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 PSMC1P6-201ENST00000477233 1319 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms