RNA–Protein interactions for RNA: ENST00000508942.1

LINC02479-201, Transcript of long intergenic non-protein coding RNA 2479, humanhuman

TSL 3 BASIC

Gene LINC02479, Length 630 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02479-201ENST00000508942 AEBP2Q6ZN18 517 aaPredicted RBP30.09■■■□□ 2.41
LINC02479-201ENST00000508942 CHIC1Q5VXU3 224 aa28.88■■■□□ 2.21
LINC02479-201ENST00000508942 SENP3Q9H4L4 574 aaPredicted RBP25.64■■□□□ 1.7
LINC02479-201ENST00000508942 PHF23Q9BUL5 403 aaPredicted RBP25.32■■□□□ 1.64
LINC02479-201ENST00000508942 FOXD1Q16676 465 aa23.84■■□□□ 1.41
LINC02479-201ENST00000508942 PLPPR3Q6T4P5 718 aa23.2■■□□□ 1.3
LINC02479-201ENST00000508942 PPP6R1Q9UPN7 881 aa22.51■■□□□ 1.19
LINC02479-201ENST00000508942 ADRA2BP18089 450 aa22.43■■□□□ 1.18
LINC02479-201ENST00000508942 PIAS4Q8N2W9 510 aaPredicted RBP22.31■■□□□ 1.16
LINC02479-201ENST00000508942 MSH5O43196 834 aa22.22■■□□□ 1.15
LINC02479-201ENST00000508942 POTEDQ86YR6 584 aa21.15■□□□□ 0.98
LINC02479-201ENST00000508942 SCAF1Q9H7N4 1312 aaKnown RBP20.56■□□□□ 0.88
LINC02479-201ENST00000508942 MAPK8IP2Q13387 824 aaPredicted RBP20.5■□□□□ 0.87
LINC02479-201ENST00000508942 DMRT2Q9Y5R5 561 aa20.39■□□□□ 0.85
LINC02479-201ENST00000508942 PPP4R3CPQ6ZMV5 832 aa20.35■□□□□ 0.85
LINC02479-201ENST00000508942 CNKSR2Q8WXI2 1034 aa19.93■□□□□ 0.78
LINC02479-201ENST00000508942 HOXD11P31277 338 aaPredicted RBP19.78■□□□□ 0.76
LINC02479-201ENST00000508942 RNF216Q9NWF9 866 aaPredicted RBP19.69■□□□□ 0.74
LINC02479-201ENST00000508942 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
LINC02479-201ENST00000508942 DCAF8L1A6NGE4 600 aa19.39■□□□□ 0.69
LINC02479-201ENST00000508942 NPM3O75607 178 aaKnown RBP19.38■□□□□ 0.69
LINC02479-201ENST00000508942 KCNA4P22459 653 aa19.26■□□□□ 0.67
LINC02479-201ENST00000508942 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
LINC02479-201ENST00000508942 RNF39Q9H2S5 420 aa19■□□□□ 0.63
LINC02479-201ENST00000508942 CACNB1Q02641 598 aaPredicted RBP18.82■□□□□ 0.6
LINC02479-201ENST00000508942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.75■□□□□ 0.59
LINC02479-201ENST00000508942 C1QBPQ07021 282 aaKnown RBP18.74■□□□□ 0.59
LINC02479-201ENST00000508942 SLC4A2P04920 1241 aa18.45■□□□□ 0.54
LINC02479-201ENST00000508942 U3KPZ7 1027 aaPredicted RBP18.44■□□□□ 0.54
LINC02479-201ENST00000508942 SLC4A1APQ9BWU0 796 aaKnown RBP18.23■□□□□ 0.51
LINC02479-201ENST00000508942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
LINC02479-201ENST00000508942 HNRNPUL2Q1KMD3 747 aaKnown RBP18.04■□□□□ 0.48
LINC02479-201ENST00000508942 SPINK5Q9NQ38 1064 aaPredicted RBP18.04■□□□□ 0.48
LINC02479-201ENST00000508942 CAPN15O75808 1086 aa17.97■□□□□ 0.47
LINC02479-201ENST00000508942 APLP2Q06481 763 aa17.97■□□□□ 0.47
LINC02479-201ENST00000508942 SAMD1Q6SPF0 538 aaPredicted RBP17.95■□□□□ 0.46
LINC02479-201ENST00000508942 MYCNP04198 464 aaPredicted RBP17.93■□□□□ 0.46
LINC02479-201ENST00000508942 FOXD4L1Q9NU39 408 aa17.9■□□□□ 0.46
LINC02479-201ENST00000508942 DSG3P32926 999 aa17.87■□□□□ 0.45
LINC02479-201ENST00000508942 ZNF219Q9P2Y4 722 aaPredicted RBP17.8■□□□□ 0.44
LINC02479-201ENST00000508942 TRHP20396 242 aaPredicted RBP17.74■□□□□ 0.43
LINC02479-201ENST00000508942 ZBTB22O15209 634 aa17.73■□□□□ 0.43
LINC02479-201ENST00000508942 ABCB7O75027 752 aa17.56■□□□□ 0.4
LINC02479-201ENST00000508942 ATF5Q9Y2D1 282 aaPredicted RBP17.46■□□□□ 0.39
LINC02479-201ENST00000508942 ATXN8OSP0DMR3 200 aa17.38■□□□□ 0.37
LINC02479-201ENST00000508942 POLA2Q14181 598 aa17.37■□□□□ 0.37
LINC02479-201ENST00000508942 CSRNP3Q8WYN3 585 aa17.18■□□□□ 0.34
LINC02479-201ENST00000508942 ZBTB12Q9Y330 459 aaPredicted RBP17.11■□□□□ 0.33
LINC02479-201ENST00000508942 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
LINC02479-201ENST00000508942 EHMT2Q96KQ7 1210 aa17.01■□□□□ 0.31
LINC02479-201ENST00000508942 OSCARQ8IYS5 282 aa16.8■□□□□ 0.28
LINC02479-201ENST00000508942 FBLN2P98095 1184 aa16.77■□□□□ 0.28
LINC02479-201ENST00000508942 AKT1S1Q96B36 256 aa16.73■□□□□ 0.27
LINC02479-201ENST00000508942 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.27
LINC02479-201ENST00000508942 POTEHQ6S545 545 aa16.63■□□□□ 0.25
LINC02479-201ENST00000508942 SPDYE2BA6NHP3 402 aa16.6■□□□□ 0.25
LINC02479-201ENST00000508942 SPDYE6P0CI01 402 aa16.6■□□□□ 0.25
LINC02479-201ENST00000508942 SPDYE2Q495Y8 402 aa16.6■□□□□ 0.25
LINC02479-201ENST00000508942 REM2Q8IYK8 340 aaPredicted RBP16.55■□□□□ 0.24
LINC02479-201ENST00000508942 CHRDL2Q6WN34 429 aa16.54■□□□□ 0.24
LINC02479-201ENST00000508942 SSUH2Q9Y2M2 353 aa16.43■□□□□ 0.22
LINC02479-201ENST00000508942 ZNF692Q9BU19 519 aaPredicted RBP16.39■□□□□ 0.21
LINC02479-201ENST00000508942 PITPNM1O00562 1244 aa16.36■□□□□ 0.21
LINC02479-201ENST00000508942 SPDYE1Q8NFV5 336 aaPredicted RBP16.22■□□□□ 0.19
LINC02479-201ENST00000508942 PIP4P2Q8N4L2 257 aa16.21■□□□□ 0.19
LINC02479-201ENST00000508942 FXR2P51116 673 aaKnown RBP eCLIP16.2■□□□□ 0.18
LINC02479-201ENST00000508942 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
LINC02479-201ENST00000508942 CLEC11AQ9Y240 323 aa16.08■□□□□ 0.16
LINC02479-201ENST00000508942 SPDYE4A6NLX3 237 aa16.04■□□□□ 0.16
LINC02479-201ENST00000508942 PRR29P0C7W0 189 aa15.91■□□□□ 0.14
LINC02479-201ENST00000508942 PRKAR2AP13861 404 aaKnown RBP15.91■□□□□ 0.14
LINC02479-201ENST00000508942 STAG3Q9UJ98 1225 aa15.82■□□□□ 0.12
LINC02479-201ENST00000508942 PROM2Q8N271 834 aa15.81■□□□□ 0.12
LINC02479-201ENST00000508942 HAX1O00165 279 aa15.78■□□□□ 0.12
LINC02479-201ENST00000508942 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
LINC02479-201ENST00000508942 SP7Q8TDD2 431 aaPredicted RBP15.74■□□□□ 0.11
LINC02479-201ENST00000508942 C19orf67A6NJJ6 358 aa15.66■□□□□ 0.1
LINC02479-201ENST00000508942 EVX2Q03828 476 aa15.64■□□□□ 0.09
LINC02479-201ENST00000508942 FARP1Q9Y4F1 1045 aaPredicted RBP15.63■□□□□ 0.09
LINC02479-201ENST00000508942 CREBZFQ9NS37 354 aa15.62■□□□□ 0.09
LINC02479-201ENST00000508942 FKBP8Q14318 412 aa15.5■□□□□ 0.07
LINC02479-201ENST00000508942 CD44P16070 742 aaKnown RBP15.43■□□□□ 0.06
LINC02479-201ENST00000508942 MNX1P50219 401 aaPredicted RBP15.43■□□□□ 0.06
LINC02479-201ENST00000508942 NPM1P06748 294 aaKnown RBP eCLIP15.33■□□□□ 0.04
LINC02479-201ENST00000508942 GABBR2O75899 941 aa15.32■□□□□ 0.04
LINC02479-201ENST00000508942 CLCN6P51797 869 aa15.27■□□□□ 0.04
LINC02479-201ENST00000508942 ZNF579Q8NAF0 562 aaKnown RBP15.27■□□□□ 0.04
LINC02479-201ENST00000508942 ZRANB1Q9UGI0 708 aa15.24■□□□□ 0.03
LINC02479-201ENST00000508942 MIER1Q8N108 512 aa15.23■□□□□ 0.03
LINC02479-201ENST00000508942 PLEKHG5O94827 1062 aa15.2■□□□□ 0.02
LINC02479-201ENST00000508942 PAK3O75914 559 aaPredicted RBP15.19■□□□□ 0.02
LINC02479-201ENST00000508942 FBXO3Q9UK99 471 aa15.16■□□□□ 0.02
LINC02479-201ENST00000508942 PLCD3Q8N3E9 789 aa15.14■□□□□ 0.01
LINC02479-201ENST00000508942 ZBTB47Q9UFB7 747 aaPredicted RBP15.07■□□□□ 0
LINC02479-201ENST00000508942 PHF12Q96QT6 1004 aa15.06■□□□□ 0
LINC02479-201ENST00000508942 POTEIP0CG38 1075 aa15.01□□□□□ -0.01
LINC02479-201ENST00000508942 CCDC61Q9Y6R9 512 aa15.01□□□□□ -0.01
LINC02479-201ENST00000508942 GALR2O43603 387 aaPredicted RBP15□□□□□ -0.01
LINC02479-201ENST00000508942 RASEFQ8IZ41 740 aa15□□□□□ -0.01
LINC02479-201ENST00000508942 TSPYL2Q9H2G4 693 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms