Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NAF1Q96HR8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NAF1Q96HR8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NAF1Q96HR8 AC242852.2-201ENST00000615738 1807 ntBASIC21.73■■□□□ 1.07
NAF1Q96HR8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NAF1Q96HR8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.72■■□□□ 1.07
NAF1Q96HR8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.72■■□□□ 1.07
NAF1Q96HR8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NAF1Q96HR8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NAF1Q96HR8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NAF1Q96HR8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NAF1Q96HR8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NAF1Q96HR8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NAF1Q96HR8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.72■■□□□ 1.07
NAF1Q96HR8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.72■■□□□ 1.07
NAF1Q96HR8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.72■■□□□ 1.07
NAF1Q96HR8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.72■■□□□ 1.07
NAF1Q96HR8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NAF1Q96HR8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NAF1Q96HR8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.72■■□□□ 1.07
NAF1Q96HR8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NAF1Q96HR8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NAF1Q96HR8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
NAF1Q96HR8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NAF1Q96HR8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NAF1Q96HR8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NAF1Q96HR8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NAF1Q96HR8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NAF1Q96HR8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
NAF1Q96HR8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.71■■□□□ 1.07
NAF1Q96HR8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NAF1Q96HR8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.71■■□□□ 1.07
NAF1Q96HR8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.71■■□□□ 1.07
NAF1Q96HR8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NAF1Q96HR8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NAF1Q96HR8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NAF1Q96HR8 AC022517.1-201ENST00000592429 346 ntBASIC21.71■■□□□ 1.07
NAF1Q96HR8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NAF1Q96HR8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NAF1Q96HR8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NAF1Q96HR8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NAF1Q96HR8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NAF1Q96HR8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
NAF1Q96HR8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
NAF1Q96HR8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
NAF1Q96HR8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NAF1Q96HR8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.7■■□□□ 1.06
NAF1Q96HR8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NAF1Q96HR8 AL137784.2-201ENST00000607332 1000 ntBASIC21.7■■□□□ 1.06
NAF1Q96HR8 AC011298.3-201ENST00000615796 283 ntBASIC21.7■■□□□ 1.06
NAF1Q96HR8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NAF1Q96HR8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NAF1Q96HR8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NAF1Q96HR8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
NAF1Q96HR8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.7■■□□□ 1.06
NAF1Q96HR8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NAF1Q96HR8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NAF1Q96HR8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NAF1Q96HR8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NAF1Q96HR8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.7■■□□□ 1.06
NAF1Q96HR8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.69■■□□□ 1.06
NAF1Q96HR8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NAF1Q96HR8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.69■■□□□ 1.06
NAF1Q96HR8 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.69■■□□□ 1.06
NAF1Q96HR8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NAF1Q96HR8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.69■■□□□ 1.06
NAF1Q96HR8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
NAF1Q96HR8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NAF1Q96HR8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NAF1Q96HR8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NAF1Q96HR8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
NAF1Q96HR8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NAF1Q96HR8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.68■■□□□ 1.06
NAF1Q96HR8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NAF1Q96HR8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NAF1Q96HR8 AC034268.1-201ENST00000441047 882 ntBASIC21.68■■□□□ 1.06
NAF1Q96HR8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.68■■□□□ 1.06
NAF1Q96HR8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.68■■□□□ 1.06
NAF1Q96HR8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NAF1Q96HR8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NAF1Q96HR8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NAF1Q96HR8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NAF1Q96HR8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NAF1Q96HR8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NAF1Q96HR8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.68■■□□□ 1.06
NAF1Q96HR8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
NAF1Q96HR8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NAF1Q96HR8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.67■■□□□ 1.06
NAF1Q96HR8 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.67■■□□□ 1.06
NAF1Q96HR8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NAF1Q96HR8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
NAF1Q96HR8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NAF1Q96HR8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NAF1Q96HR8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NAF1Q96HR8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NAF1Q96HR8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.67■■□□□ 1.06
NAF1Q96HR8 MIR6089-201ENST00000616698 64 ntBASIC21.67■■□□□ 1.06
NAF1Q96HR8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NAF1Q96HR8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NAF1Q96HR8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms