Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
CDCA5Q96FF9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDCA5Q96FF9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
CDCA5Q96FF9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CDCA5Q96FF9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDCA5Q96FF9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC25.71■■□□□ 1.71
CDCA5Q96FF9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
CDCA5Q96FF9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDCA5Q96FF9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDCA5Q96FF9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.71
CDCA5Q96FF9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CDCA5Q96FF9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CDCA5Q96FF9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
CDCA5Q96FF9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CDCA5Q96FF9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC25.7■■□□□ 1.7
CDCA5Q96FF9 AC138932.3-201ENST00000567634 1902 ntBASIC25.7■■□□□ 1.7
CDCA5Q96FF9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CDCA5Q96FF9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CDCA5Q96FF9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CDCA5Q96FF9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.69■■□□□ 1.7
CDCA5Q96FF9 RPS2P52-201ENST00000469610 820 ntBASIC25.69■■□□□ 1.7
CDCA5Q96FF9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.69■■□□□ 1.7
CDCA5Q96FF9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDCA5Q96FF9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA5Q96FF9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA5Q96FF9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA5Q96FF9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.68■■□□□ 1.7
CDCA5Q96FF9 MIPEPP3-201ENST00000412105 444 ntBASIC25.68■■□□□ 1.7
CDCA5Q96FF9 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.68■■□□□ 1.7
CDCA5Q96FF9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA5Q96FF9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDCA5Q96FF9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDCA5Q96FF9 AC010141.2-201ENST00000452426 721 ntBASIC25.67■■□□□ 1.7
CDCA5Q96FF9 MARS-234ENST00000630571 216 ntTSL 5 BASIC25.67■■□□□ 1.7
CDCA5Q96FF9 MARS-235ENST00000630803 183 ntTSL 3 BASIC25.67■■□□□ 1.7
CDCA5Q96FF9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.67■■□□□ 1.7
CDCA5Q96FF9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDCA5Q96FF9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
CDCA5Q96FF9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDCA5Q96FF9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDCA5Q96FF9 PPP1R14BP2-201ENST00000426284 444 ntBASIC25.66■■□□□ 1.7
CDCA5Q96FF9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDCA5Q96FF9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDCA5Q96FF9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDCA5Q96FF9 DUSP8P3-201ENST00000399571 1760 ntBASIC25.66■■□□□ 1.7
CDCA5Q96FF9 AC055733.4-201ENST00000638462 1354 ntBASIC25.66■■□□□ 1.7
CDCA5Q96FF9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDCA5Q96FF9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
CDCA5Q96FF9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDCA5Q96FF9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CDCA5Q96FF9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDCA5Q96FF9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
CDCA5Q96FF9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC25.65■■□□□ 1.7
CDCA5Q96FF9 SLC7A5P1-201ENST00000568957 537 ntBASIC25.65■■□□□ 1.7
CDCA5Q96FF9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC25.65■■□□□ 1.7
CDCA5Q96FF9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC25.65■■□□□ 1.7
CDCA5Q96FF9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDCA5Q96FF9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDCA5Q96FF9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CDCA5Q96FF9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.65■■□□□ 1.7
CDCA5Q96FF9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 CYP2T1P-201ENST00000432607 1285 ntBASIC25.64■■□□□ 1.7
CDCA5Q96FF9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 AC098590.1-201ENST00000468126 897 ntBASIC25.64■■□□□ 1.7
CDCA5Q96FF9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 KRT18P20-201ENST00000548986 1279 ntBASIC25.64■■□□□ 1.7
CDCA5Q96FF9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25.64■■□□□ 1.7
CDCA5Q96FF9 AC013268.1-206ENST00000638368 961 ntBASIC25.64■■□□□ 1.7
CDCA5Q96FF9 AC112229.1-201ENST00000639295 961 ntBASIC25.64■■□□□ 1.7
CDCA5Q96FF9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.64■■□□□ 1.69
CDCA5Q96FF9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.64■■□□□ 1.69
CDCA5Q96FF9 MKRN4P-201ENST00000444706 1521 ntBASIC25.63■■□□□ 1.69
CDCA5Q96FF9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDCA5Q96FF9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDCA5Q96FF9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDCA5Q96FF9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC25.63■■□□□ 1.69
CDCA5Q96FF9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.63■■□□□ 1.69
CDCA5Q96FF9 AC138907.5-202ENST00000569484 235 ntBASIC25.63■■□□□ 1.69
CDCA5Q96FF9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.63■■□□□ 1.69
CDCA5Q96FF9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.63■■□□□ 1.69
CDCA5Q96FF9 DUSP8P5-201ENST00000422884 1815 ntBASIC25.63■■□□□ 1.69
CDCA5Q96FF9 AC068338.2-201ENST00000563278 1430 ntBASIC25.63■■□□□ 1.69
CDCA5Q96FF9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDCA5Q96FF9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC25.62■■□□□ 1.69
CDCA5Q96FF9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDCA5Q96FF9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDCA5Q96FF9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDCA5Q96FF9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms