Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.41■□□□□ 0.86
TM9SF4Q92544 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF4Q92544 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF4Q92544 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF4Q92544 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF4Q92544 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF4Q92544 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TM9SF4Q92544 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF4Q92544 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF4Q92544 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF4Q92544 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF4Q92544 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF4Q92544 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF4Q92544 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF4Q92544 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF4Q92544 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF4Q92544 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF4Q92544 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF4Q92544 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TM9SF4Q92544 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF4Q92544 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF4Q92544 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.4■□□□□ 0.86
TM9SF4Q92544 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
TM9SF4Q92544 KRT18P14-201ENST00000534205 1250 ntBASIC20.4■□□□□ 0.86
TM9SF4Q92544 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
TM9SF4Q92544 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF4Q92544 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF4Q92544 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF4Q92544 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF4Q92544 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
TM9SF4Q92544 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.39■□□□□ 0.86
TM9SF4Q92544 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
TM9SF4Q92544 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF4Q92544 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TM9SF4Q92544 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.39■□□□□ 0.85
TM9SF4Q92544 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF4Q92544 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF4Q92544 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TM9SF4Q92544 AC010525.1-201ENST00000585559 441 ntBASIC20.39■□□□□ 0.85
TM9SF4Q92544 NTF6G-201ENST00000591094 616 ntBASIC20.39■□□□□ 0.85
TM9SF4Q92544 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.39■□□□□ 0.85
TM9SF4Q92544 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF4Q92544 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM9SF4Q92544 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM9SF4Q92544 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TM9SF4Q92544 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.38■□□□□ 0.85
TM9SF4Q92544 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TM9SF4Q92544 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
TM9SF4Q92544 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM9SF4Q92544 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.38■□□□□ 0.85
TM9SF4Q92544 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TM9SF4Q92544 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TM9SF4Q92544 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.38■□□□□ 0.85
TM9SF4Q92544 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.38■□□□□ 0.85
TM9SF4Q92544 AC105233.4-201ENST00000642045 216 ntBASIC20.38■□□□□ 0.85
TM9SF4Q92544 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM9SF4Q92544 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM9SF4Q92544 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM9SF4Q92544 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TM9SF4Q92544 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.38■□□□□ 0.85
TM9SF4Q92544 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TM9SF4Q92544 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TM9SF4Q92544 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM9SF4Q92544 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TM9SF4Q92544 LINC00526-201ENST00000581067 1875 ntBASIC20.37■□□□□ 0.85
TM9SF4Q92544 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TM9SF4Q92544 TERF1P2-201ENST00000583350 1212 ntBASIC20.37■□□□□ 0.85
TM9SF4Q92544 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM9SF4Q92544 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TM9SF4Q92544 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM9SF4Q92544 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM9SF4Q92544 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TM9SF4Q92544 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.37■□□□□ 0.85
TM9SF4Q92544 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TM9SF4Q92544 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TM9SF4Q92544 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM9SF4Q92544 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM9SF4Q92544 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM9SF4Q92544 GUSBP5-202ENST00000510805 1989 ntBASIC20.36■□□□□ 0.85
TM9SF4Q92544 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM9SF4Q92544 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM9SF4Q92544 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM9SF4Q92544 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TM9SF4Q92544 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.36■□□□□ 0.85
TM9SF4Q92544 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.36■□□□□ 0.85
TM9SF4Q92544 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.36■□□□□ 0.85
TM9SF4Q92544 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TM9SF4Q92544 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TM9SF4Q92544 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.36■□□□□ 0.85
TM9SF4Q92544 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.36■□□□□ 0.85
TM9SF4Q92544 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
TM9SF4Q92544 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TM9SF4Q92544 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.35■□□□□ 0.85
TM9SF4Q92544 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TM9SF4Q92544 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
TM9SF4Q92544 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM9SF4Q92544 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM9SF4Q92544 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TM9SF4Q92544 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TM9SF4Q92544 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms