Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC107Q8WV48 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC107Q8WV48 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC107Q8WV48 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CCDC107Q8WV48 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC107Q8WV48 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC107Q8WV48 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC107Q8WV48 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC107Q8WV48 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CCDC107Q8WV48 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC107Q8WV48 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC107Q8WV48 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC107Q8WV48 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC107Q8WV48 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC107Q8WV48 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC107Q8WV48 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC107Q8WV48 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC107Q8WV48 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCDC107Q8WV48 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC107Q8WV48 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC107Q8WV48 RARRES2P1-201ENST00000474487 481 ntBASIC18.65■□□□□ 0.58
CCDC107Q8WV48 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC107Q8WV48 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC107Q8WV48 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCDC107Q8WV48 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC107Q8WV48 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC107Q8WV48 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC107Q8WV48 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC107Q8WV48 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CCDC107Q8WV48 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC107Q8WV48 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 AC073130.3-201ENST00000624389 2278 ntBASIC18.64■□□□□ 0.57
CCDC107Q8WV48 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 AC005703.6-201ENST00000623265 1329 ntBASIC18.64■□□□□ 0.57
CCDC107Q8WV48 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC107Q8WV48 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC107Q8WV48 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC107Q8WV48 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC107Q8WV48 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC107Q8WV48 FAM99A-202ENST00000538190 1989 ntBASIC18.63■□□□□ 0.57
CCDC107Q8WV48 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC107Q8WV48 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC107Q8WV48 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC107Q8WV48 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC107Q8WV48 KRT125P-201ENST00000546827 989 ntBASIC18.63■□□□□ 0.57
CCDC107Q8WV48 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC107Q8WV48 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC107Q8WV48 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC107Q8WV48 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC107Q8WV48 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC107Q8WV48 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC107Q8WV48 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC107Q8WV48 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC107Q8WV48 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC107Q8WV48 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC107Q8WV48 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC107Q8WV48 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC107Q8WV48 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC107Q8WV48 MIR6722-201ENST00000617286 78 ntBASIC18.62■□□□□ 0.57
CCDC107Q8WV48 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC107Q8WV48 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC107Q8WV48 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC107Q8WV48 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC107Q8WV48 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC107Q8WV48 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC107Q8WV48 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC107Q8WV48 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC107Q8WV48 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC107Q8WV48 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC107Q8WV48 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC107Q8WV48 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC107Q8WV48 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC107Q8WV48 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC107Q8WV48 AC092028.1-203ENST00000608262 953 ntBASIC18.61■□□□□ 0.57
CCDC107Q8WV48 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC107Q8WV48 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC107Q8WV48 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC107Q8WV48 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC107Q8WV48 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC107Q8WV48 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC107Q8WV48 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms